Detail information of GWHGAAZE033264


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011097643.11.43245E-13PREDICTED: DNA polymerase zeta processivity subunit isoform X1 [Sesamum indicum]
Swissprottr|Q94FL5|REV7_ARATH0.000000001DNA polymerase zeta processivity subunit
trEMBLtr|A0A0A0KEI1|A0A0A0KEI1_CUCSA7E-14Uncharacterized protein {ECO:0000313|EMBL:KGN46822.1}
TAIR10AT1G16590.10.00000002DNA-binding HORMA family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene37628803763772-
GWHAAZE00000094mRNA37628803763772-
GWHAAZE00000094exon37628803762953-
GWHAAZE00000094exon37633843763574-
GWHAAZE00000094exon37636423763772-
GWHAAZE00000094CDS37636423763772-
GWHAAZE00000094CDS37633843763574-
GWHAAZE00000094CDS37628803762953-
Transcript Sequence

Network for GWHGAAZE033264

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13728MAD2L2 Cell cycle map04110
Oocyte meiosismap04114
Progesterone-mediated oocyte maturationmap04914

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.110
SRR3591706second leaf1.007
SRR3591707mature leaf4.270
SRR3591708Shoot apex4.710
SRR3591709Stem7.349
SRR3591710White floral bud10.800
SRR3591711White flower9.628
SRR3591712Green floral bud10.268
SRR3591713Yellow flower8.701
SRP173429 SRR8316895Juvenile bud stage 9.884
SRR8316896Juvenile bud stage 13.273
SRR8316897Juvenile bud stage 5.063
SRR8316894Third green stage 5.786
SRR8316900Third green stage 17.008
SRR8316901Third green stage 18.655
SRR8316898Complete white stage 13.657
SRR8316899Complete white stage 30.495
SRR8316903Complete white stage 20.228
SRR8316902Silver flowering stage12.093
SRR8316904Silver flowering stage16.677
SRR8316905Silver flowering stage8.042
SRR8316906Gold flowering stage 21.241
SRR8316907Gold flowering stage 22.285
SRR8316908Gold flowering stage 16.131
SRP132670SRR6706286Control8.605
SRR6706287Light intensity 50%9.856
SRR6706288Light intensity 20%9.882
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.567
CNS0095593Slightly white alabastrum(diploid) 213.769
CNS0095594Slightly white alabastrum(diploid) 39.964
CNS0095595Whole white alabastrum(diploid) 213.994
CNS0095596Whole white alabastrum(diploid) 311.711
CNS0095597Whole white alabastrum(diploid) 412.373
CNS0095598Silvery flower (diploied) 119.254
CNS0095599Silvery flower (diploied) 215.777
CNS0095600Silvery flower (diploied) 319.874
CNS0095601Golden flower (diploid) 118.655
CNS0095602Golden flower (diploid) 219.715
CNS0095603Golden flower (diploid) 319.941
CNS0095604Slightly white alabastrum(tetraploid) 19.501
CNS0095605Slightly white alabastrum(tetraploid) 28.597
CNS0095606Slightly white alabastrum(tetraploid) 314.600
CNS0095607Whole white alabastrum(tetraploid) 16.209
CNS0095608Whole white alabastrum(tetraploid) 26.682
CNS0095609Whole white alabastrum(tetraploid) 310.009
CNS0095610Silvery flower (tetraploid) 115.314
CNS0095611Silvery flower (tetraploid) 220.239
CNS0095612Silvery flower (tetraploid) 324.847
CNS0095613Golden flower (tetraploid) 17.851
CNS0095614Golden flower (tetraploid) 213.718
CNS0095615Golden flower (tetraploid) 39.333
CRA001975CRR073297Stem 16.843
CRR073298Stem 27.966
CRR073299Stem 36.312
CRR073300Leaf 18.311
CRR073301Leaf 27.929
CRR073302Leaf 33.942
CRR073303Juvenile bud 17.018
CRR073304Juvenile bud 28.283
CRR073305Juvenile bud 39.284
CRR073306Third green 14.022
CRR073307Third green 23.878
CRR073308Third green 35.522
CRR073309Second white 18.683
CRR073310Second white 27.163
CRR073311Second white 38.090
CRR073312Silver flowering 14.003
CRR073313Silver flowering 23.630
CRR073314Silver flowering 34.623
CRR073315Gold flowering 110.126
CRR073316Gold flowering 29.078
CRR073317Gold flowering 38.293
CRR073318Tawny withering 15.155
CRR073319Tawny withering 28.101
CRR073320Tawny withering 37.797