Detail information of GWHGAAZE033285


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004304656.18.7023E-152PREDICTED: altered inheritance of mitochondria protein 32-like [Fragaria vesca subsp. vesca]
COGYP_002729865.10.000000007ferredoxin, 2Fe-2S (2FeCpFd)
trEMBLtr|A0A067LGD5|A0A067LGD5_JATCU2E-150Uncharacterized protein {ECO:0000313|EMBL:KDP46413.1}
TAIR10AT3G27570.11E-95Sucrase/ferredoxin-like family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene42568084259824+
GWHAAZE00000094mRNA42568084259824+
GWHAAZE00000094exon42568084257062+
GWHAAZE00000094exon42575214257606+
GWHAAZE00000094exon42579304258235+
GWHAAZE00000094exon42583964258479+
GWHAAZE00000094exon42590464259298+
GWHAAZE00000094exon42596454259824+
GWHAAZE00000094CDS42568084257062+
GWHAAZE00000094CDS42575214257606+
GWHAAZE00000094CDS42579304258235+
GWHAAZE00000094CDS42583964258479+
GWHAAZE00000094CDS42590464259298+
GWHAAZE00000094CDS42596454259824+
Transcript Sequence

Network for GWHGAAZE033285

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0199


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06999.13Suc_Fer-like342451.70E-42
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf81.188
SRR3591706second leaf98.537
SRR3591707mature leaf104.539
SRR3591708Shoot apex63.094
SRR3591709Stem107.222
SRR3591710White floral bud166.940
SRR3591711White flower159.566
SRR3591712Green floral bud176.712
SRR3591713Yellow flower167.182
SRP173429 SRR8316895Juvenile bud stage 74.031
SRR8316896Juvenile bud stage 122.747
SRR8316897Juvenile bud stage 48.739
SRR8316894Third green stage 52.764
SRR8316900Third green stage 194.369
SRR8316901Third green stage 183.768
SRR8316898Complete white stage 75.870
SRR8316899Complete white stage 199.476
SRR8316903Complete white stage 113.569
SRR8316902Silver flowering stage58.227
SRR8316904Silver flowering stage59.532
SRR8316905Silver flowering stage40.296
SRR8316906Gold flowering stage 124.676
SRR8316907Gold flowering stage 138.380
SRR8316908Gold flowering stage 128.549
SRP132670SRR6706286Control269.114
SRR6706287Light intensity 50%269.303
SRR6706288Light intensity 20%263.872
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1106.311
CNS0095593Slightly white alabastrum(diploid) 2113.498
CNS0095594Slightly white alabastrum(diploid) 3114.107
CNS0095595Whole white alabastrum(diploid) 2127.501
CNS0095596Whole white alabastrum(diploid) 3136.082
CNS0095597Whole white alabastrum(diploid) 4121.728
CNS0095598Silvery flower (diploied) 1100.940
CNS0095599Silvery flower (diploied) 288.827
CNS0095600Silvery flower (diploied) 3169.692
CNS0095601Golden flower (diploid) 195.518
CNS0095602Golden flower (diploid) 2161.884
CNS0095603Golden flower (diploid) 3155.782
CNS0095604Slightly white alabastrum(tetraploid) 1134.373
CNS0095605Slightly white alabastrum(tetraploid) 2122.725
CNS0095606Slightly white alabastrum(tetraploid) 3116.939
CNS0095607Whole white alabastrum(tetraploid) 1123.169
CNS0095608Whole white alabastrum(tetraploid) 2129.299
CNS0095609Whole white alabastrum(tetraploid) 3173.806
CNS0095610Silvery flower (tetraploid) 1179.140
CNS0095611Silvery flower (tetraploid) 2155.876
CNS0095612Silvery flower (tetraploid) 3148.826
CNS0095613Golden flower (tetraploid) 1127.054
CNS0095614Golden flower (tetraploid) 2175.270
CNS0095615Golden flower (tetraploid) 3128.518
CRA001975CRR073297Stem 1139.609
CRR073298Stem 2149.400
CRR073299Stem 3151.531
CRR073300Leaf 1215.003
CRR073301Leaf 2208.335
CRR073302Leaf 3202.445
CRR073303Juvenile bud 1272.890
CRR073304Juvenile bud 2292.744
CRR073305Juvenile bud 3259.209
CRR073306Third green 1236.741
CRR073307Third green 2187.863
CRR073308Third green 3192.799
CRR073309Second white 1170.421
CRR073310Second white 2156.466
CRR073311Second white 3118.640
CRR073312Silver flowering 1105.918
CRR073313Silver flowering 2121.877
CRR073314Silver flowering 3116.611
CRR073315Gold flowering 193.513
CRR073316Gold flowering 2108.007
CRR073317Gold flowering 383.768
CRR073318Tawny withering 1114.929
CRR073319Tawny withering 281.539
CRR073320Tawny withering 380.380