Gene detail

Detail information of GWHGAAZE033347

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU45398.1	0	hypothetical protein MIMGU_mgv1a005489mg [Erythranthe guttata]
COG	YP_002315116.1	3E-56	uridine kinase
Swissprot	tr\|Q9FKS0\|UKL1_ARATH	0	Putative uracil phosphoribosyltransferase (Precursor)
trEMBL	tr\|A0A022S0F1\|A0A022S0F1_ERYGU	0	Uridine kinase {ECO:0000256\|RuleBase:RU003825}
TAIR10	AT5G40870.1	0	uridine kinase/uracil phosphoribosyltransferase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000094	gene	5172574	5181074	+
GWHAAZE00000094	mRNA	5172574	5181074	+
GWHAAZE00000094	exon	5172574	5172730	+
GWHAAZE00000094	exon	5172925	5173016	+
GWHAAZE00000094	exon	5173854	5173923	+
GWHAAZE00000094	exon	5174099	5174217	+
GWHAAZE00000094	exon	5175890	5175986	+
GWHAAZE00000094	exon	5176793	5176907	+
GWHAAZE00000094	exon	5177164	5177395	+
GWHAAZE00000094	exon	5177818	5177901	+
GWHAAZE00000094	exon	5178010	5178070	+
GWHAAZE00000094	exon	5178834	5178894	+
GWHAAZE00000094	exon	5179891	5179984	+
GWHAAZE00000094	exon	5180087	5180159	+
GWHAAZE00000094	exon	5180757	5180839	+
GWHAAZE00000094	exon	5180928	5181074	+
GWHAAZE00000094	CDS	5172574	5172730	+
GWHAAZE00000094	CDS	5172925	5173016	+
GWHAAZE00000094	CDS	5173854	5173923	+
GWHAAZE00000094	CDS	5174099	5174217	+
GWHAAZE00000094	CDS	5175890	5175986	+
GWHAAZE00000094	CDS	5176793	5176907	+
GWHAAZE00000094	CDS	5177164	5177395	+
GWHAAZE00000094	CDS	5177818	5177901	+
GWHAAZE00000094	CDS	5178010	5178070	+
GWHAAZE00000094	CDS	5178834	5178894	+
GWHAAZE00000094	CDS	5179891	5179984	+
GWHAAZE00000094	CDS	5180087	5180159	+
GWHAAZE00000094	CDS	5180757	5180839	+
GWHAAZE00000094	CDS	5180928	5181074	+

Transcript Sequence
>GWHTAAZE033386 ATGGAGGCAGCGTCGGGTCCTCATTTCTCCGGCTTACGCCTAGACGGTCTACTATCTTCCTCCGCTTCTTCATCCTCCCCTCGCTTTTCTTCTTCTTCTGCTTCAATTCCTTCAACCCTAGCTGACTCCAATGCTCCTAAACAGCCCTTTGTCATCGGGGTTTCTGGAGGTACAGCTTCGGGTAAGACTACGGTGTGTGACATGATTATTCAACAGCTTCATGATCATCGTGTTGTCCTTGTCAATCAGGATTCTTTTTACCGTGGCTTGACACCTGAAGAATCAGAACGTGTACATGAATATAATTTTGATCATCCTGATGCATTTGACACTGAGCAGCTTTTAGAGTGTATTGGTAAGCTCAAACTAGGACAACCTGTCCATGTTCCAATATATGACTTTAAGAGCCATCGAAGGTGTTCAGATTCCTTCCGGCAGGTAAATGCATCTGATGTAATTATCTTGGAGGGGATACTGGTTTTCCACGACCAAAGTGTCCGGAACTTGATGAATATGAAGATTTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATAAGGCGTGACACGGTTGAGAGGGGTAGGGACATAAACTCTGTTCTTGAACAGGCAAGCCCCTTTTACTTTTTATGCATTCTACTTAGATTAATAGATCTCGCTTATATCATGTGTATTGTGCAGTATGCGAAGTTTGTCAAGCCTGCTTTTGATGATTTCATTCTTCCATCCAAAAAGTACGCTGATGTTATCATACCCCGTGGAGGTGATAATCATGTTGCCATTGATTTGATTGTGCAACATATTCGCACAAAGCTTGGCCAGCATGACCTTTGCAAAATATATCCCAATGTGTATGTTATTCAATCAACCTTCCAGATTAGAGGTATGCACACACTGATTCGAGATCGAGAGATATCAAAGCATGATTTTGTCTTTTATTCAGATCGACTTATTCGTCTGGTGGTGGAGCATGGCCTTGGCCATTTACCATTCACCGAGATGCAAGTAGTCACTCCGACAGGATCAGTATATACTGGAGTTGACTTTTGCAAGAAATTGTGTGGAGTCTCCATTGTTCGAAGTGGTGAAAGCATGGAGAATGCATTGCGTGCTTGTTGCAAAGGAATAAAAATAGGAAAAATTCTCATTCATCGGGATGGTGACAATGGGAAACAACTTATATATGAAAAACTTCCAAAAGACATTTCGGAACGGCACGTACTGCTCCTGGATCCAGTTCTTGCTACAGGTAACTCTGCTAACCAGGCAATTGAGCTACTCATACAGAAAGGAGTCCCAGAGTCCTACATTATATTCCTAAACCTTATTTCAGCACCTGAGGGAATACATTGTGTTAGCAAGCGGTTCCCGTCATTGAAGATTGTGACTTCAGAGATTGATGTAGCGTTGAATGAAGAATTCCGTGTCATACCAGGCATGGGAGAGTTTGGTGATCGTTACTTTGGTACGGACGATTGA

Network for GWHGAAZE033347

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00485.19	PRK	51	206	8.40E-37
PF00485.19	PRK	227	261	0.00011
PF14681.7	UPRTase	291	492	2.20E-72

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00876	udk, UCK	Metabolic pathways	map01100
		Pyrimidine metabolism	map00240
		Drug metabolism - other enzymes	map00983

Gene Ontology

GO term	Ontology	Name
GO:0009116	biological_process	nucleoside metabolic process
GO:0005524	molecular_function	ATP binding
GO:0016301	molecular_function	kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	23.303
	SRR3591706	second leaf	21.107
	SRR3591707	mature leaf	25.424
	SRR3591708	Shoot apex	28.298
	SRR3591709	Stem	38.421
	SRR3591710	White floral bud	36.111
	SRR3591711	White flower	55.512
	SRR3591712	Green floral bud	30.237
	SRR3591713	Yellow flower	51.741
SRP173429	SRR8316895	Juvenile bud stage	24.924
	SRR8316896	Juvenile bud stage	34.202
	SRR8316897	Juvenile bud stage	22.704
	SRR8316894	Third green stage	13.473
	SRR8316900	Third green stage	33.399
	SRR8316901	Third green stage	33.732
	SRR8316898	Complete white stage	11.700
	SRR8316899	Complete white stage	42.828
	SRR8316903	Complete white stage	20.434
	SRR8316902	Silver flowering stage	14.620
	SRR8316904	Silver flowering stage	16.367
	SRR8316905	Silver flowering stage	6.818
	SRR8316906	Gold flowering stage	27.936
	SRR8316907	Gold flowering stage	22.080
	SRR8316908	Gold flowering stage	24.813
SRP132670	SRR6706286	Control	23.216
	SRR6706287	Light intensity 50%	23.656
	SRR6706288	Light intensity 20%	27.052
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	24.241
	CNS0095593	Slightly white alabastrum(diploid) 2	25.862
	CNS0095594	Slightly white alabastrum(diploid) 3	24.290
	CNS0095595	Whole white alabastrum(diploid) 2	22.179
	CNS0095596	Whole white alabastrum(diploid) 3	18.421
	CNS0095597	Whole white alabastrum(diploid) 4	21.237
	CNS0095598	Silvery flower (diploied) 1	30.529
	CNS0095599	Silvery flower (diploied) 2	23.377
	CNS0095600	Silvery flower (diploied) 3	29.753
	CNS0095601	Golden flower (diploid) 1	23.529
	CNS0095602	Golden flower (diploid) 2	29.052
	CNS0095603	Golden flower (diploid) 3	30.384
	CNS0095604	Slightly white alabastrum(tetraploid) 1	24.647
	CNS0095605	Slightly white alabastrum(tetraploid) 2	20.803
	CNS0095606	Slightly white alabastrum(tetraploid) 3	37.992
	CNS0095607	Whole white alabastrum(tetraploid) 1	21.757
	CNS0095608	Whole white alabastrum(tetraploid) 2	18.575
	CNS0095609	Whole white alabastrum(tetraploid) 3	28.970
	CNS0095610	Silvery flower (tetraploid) 1	25.257
	CNS0095611	Silvery flower (tetraploid) 2	31.619
	CNS0095612	Silvery flower (tetraploid) 3	24.352
	CNS0095613	Golden flower (tetraploid) 1	17.538
	CNS0095614	Golden flower (tetraploid) 2	21.489
	CNS0095615	Golden flower (tetraploid) 3	14.510
CRA001975	CRR073297	Stem 1	31.654
	CRR073298	Stem 2	26.816
	CRR073299	Stem 3	25.577
	CRR073300	Leaf 1	26.863
	CRR073301	Leaf 2	25.252
	CRR073302	Leaf 3	22.189
	CRR073303	Juvenile bud 1	27.398
	CRR073304	Juvenile bud 2	17.143
	CRR073305	Juvenile bud 3	29.095
	CRR073306	Third green 1	8.483
	CRR073307	Third green 2	8.637
	CRR073308	Third green 3	10.302
	CRR073309	Second white 1	15.024
	CRR073310	Second white 2	14.316
	CRR073311	Second white 3	13.410
	CRR073312	Silver flowering 1	9.743
	CRR073313	Silver flowering 2	10.998
	CRR073314	Silver flowering 3	8.381
	CRR073315	Gold flowering 1	17.950
	CRR073316	Gold flowering 2	28.059
	CRR073317	Gold flowering 3	18.635
	CRR073318	Tawny withering 1	35.551
	CRR073319	Tawny withering 2	53.920
	CRR073320	Tawny withering 3	37.720