Gene detail

Detail information of GWHGAAZE033374

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009761487.1	0	PREDICTED: exocyst complex component EXO70B1-like [Nicotiana sylvestris]
Swissprot	tr\|Q9FGH9\|E70B1_ARATH	4E-122	Exocyst complex component EXO70B1
trEMBL	tr\|K4BDN2\|K4BDN2_SOLLC	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc02g094370.1.1}
TAIR10	AT5G13990.1	6E-172	exocyst subunit exo70 family protein C2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000094	gene	5868102	5871162	+
GWHAAZE00000094	mRNA	5868102	5871162	+
GWHAAZE00000094	exon	5868102	5868104	+
GWHAAZE00000094	exon	5869042	5871162	+
GWHAAZE00000094	CDS	5868102	5868104	+
GWHAAZE00000094	CDS	5869042	5871162	+

Transcript Sequence
>GWHTAAZE033413 ATGGATGAGTCCCAAGAAGAAACGAAGAACAAAGATGAATCTACTACTGCTGCCACAGCAGCAGCAGCAGAAGAAAAATATGAAACTAATAATGTAGACAAAGGCGAAATAGAGACGAAAGATAACAATGACGTCCATGAGGAGGACGGTAAAGTGGATGGCGATGCAGCAGATAACAATAATAACTCTGAGTTGGAGAACAAAGAGGGAGATCCGACTGATGCAGATGTCCCAGAAGAAACTCCGCCTCCTCCTGACCTCAGCAAAGTCTCCGAAGAGATTGATAAATTTCTCTCTGATCTACTGAGCCTCGAAACTGCAGGCAATGATGAATCTGAACCCCTGGAAATTCCAGAATTCGTGAAACAGTTTGCATTCCTAGTTGAAGCAAGGATCACAAATTATGATTCAGGTGAAAGCCCAGTGAAATGGAGTCAGCTAAATGAGGAGGACACGTCTTCGTTTCTTGAGATCGTGGATCGAGTCTCCAAGCTATCAACATCCATATGTAAGTTCACTTCTCAATCGACATATGTGTCGTCCATCAATCACATTGGAGCTATTCTTCAACGAGCAATGTCATACCTAGAGGACGAATTCAGGTCCATTGTTGAAGATCATCATAGCACTGCTCCAGATCCGGATAGTAGCAGCAACAATAATAGCAATAATAACGACTCCAAAACAAAGAGCTCTAATGAAGATACCGGCCAAAGTGCCGGCCTTCCATCTGAACCTACAGACGAAAACAGATTGATGGGATACTCAGAGGAGCTCGTGTCAAGTATGAATAGATTAGCCAAGGCAATCCTGTCAGGAGGACATGAGGCGGAGATATGTCAGGCCTATTTCATTGGACGAAGGAATGCACTGGACCATAACTTGCACAAACTAGGATTTGAGAAATTTTGCATCGATGATATGCAGAAGATGCAGTGGGAGCCGTTGGAGAGAGAGATTGTGGCGTGGATCAAAACATTCAAGGAATTTGTCAACGTTATATTTCCGGCCGAGCGTAAGCTCATGGAGGCTGTTTTTTCAGACTACAACTCGGTCAGTGAGAGCCTCTTTGGTAGCCTGTTCCGGGGCGTGATGATTCAACTTCTCAATTTTAGCGAGGCTGTCACGATGACCAAGCGTTCTGCAGAGAAGCTCTTCAAGTTTCTTGACATATACGAGACCTTACGAGATCTGATCCCAAGCATGGAGAGTTTGTTCCCGGCTGGAGGTGTGGATGAGCTCAAGGCGGAAGCAACGTTGACTCGGGGCCGGCTTGGAGACGCAATGGTTTGCATCTTCGGTGAGCTGGAGAACTCTGTCAAGGCTGACTCTGGGAAGACCCCCGTCCCGGGAGGAGCAGTGCACCCCCTGACACGTTACACCCTCAATTACCTAAAGTATGCCTGCGAGTACAAGGACACCCTGGAACAAGTCTTCAGGGAACACCAGAAGATTGAGCGTGCTGATTCAGCCACCATAACGGACTACGACTTCGCAGCTGGACAAGGCCAGAATGAGAAGCCCGGAGGACAATCATCATTCGAGGTGCAGTTGAGGAAAGTGATGGATCTGTTGGATGCGAATCTGGAGGCAAAGTCAAAGCTTTACAAAGACACGTCGTTGAGCTTGATATTCATGATGAACAACGGGAGGTACATACTGCAGAAGATAAAGGGAGCAGCAGAGATAAACAGCTTGATGGGGGATCCATGGTACAGGAAGAGGTCATCGGATCTGAGGCAGTACCACAAGAATTACCAGAGGGAGACGTGGATGAAGCTGCTGCAGTCATTGCAGGCGGAGGGATTGGTGGTGCACGGGAAGGTGGTGAAGCCTGTACTGAAGGAGAGGTTCAAGAGCTTCAACGCCATGTTTGATGAGATCCACAGGACCCAGAGCACCTGGATAGTTAGCGATGAGCAGCTACAATCAGAGCTCAGGGTTTCCATATCGGCAGTGGTGATTCCAGCATACAGGTCTTTCGTGGCAAGGTTCAGCCAGGTATTCACTCCTGGAAGGCAGGTGGAGAAGTACATAAAGTACCAGCCTGAAGACATAGAGACACATATTGATGAGCTGTTTGACGGTAATTCCACCCCCATGGGAAGAGGAAACCGCAAGTAA

Network for GWHGAAZE033374

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	322	692	6.50E-115

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.038
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.313
	SRR3591710	White floral bud	26.336
	SRR3591711	White flower	0.825
	SRR3591712	Green floral bud	89.628
	SRR3591713	Yellow flower	0.283
SRP173429	SRR8316895	Juvenile bud stage	13.816
	SRR8316896	Juvenile bud stage	43.732
	SRR8316897	Juvenile bud stage	22.567
	SRR8316894	Third green stage	19.317
	SRR8316900	Third green stage	96.317
	SRR8316901	Third green stage	96.209
	SRR8316898	Complete white stage	0.079
	SRR8316899	Complete white stage	0.348
	SRR8316903	Complete white stage	0.098
	SRR8316902	Silver flowering stage	0.181
	SRR8316904	Silver flowering stage	0.617
	SRR8316905	Silver flowering stage	0.239
	SRR8316906	Gold flowering stage	0.166
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.044
SRP132670	SRR6706286	Control	49.806
	SRR6706287	Light intensity 50%	46.830
	SRR6706288	Light intensity 20%	40.377
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	58.078
	CNS0095593	Slightly white alabastrum(diploid) 2	42.432
	CNS0095594	Slightly white alabastrum(diploid) 3	59.089
	CNS0095595	Whole white alabastrum(diploid) 2	93.833
	CNS0095596	Whole white alabastrum(diploid) 3	125.379
	CNS0095597	Whole white alabastrum(diploid) 4	94.099
	CNS0095598	Silvery flower (diploied) 1	1.013
	CNS0095599	Silvery flower (diploied) 2	3.961
	CNS0095600	Silvery flower (diploied) 3	1.003
	CNS0095601	Golden flower (diploid) 1	0.897
	CNS0095602	Golden flower (diploid) 2	0.898
	CNS0095603	Golden flower (diploid) 3	0.854
	CNS0095604	Slightly white alabastrum(tetraploid) 1	135.027
	CNS0095605	Slightly white alabastrum(tetraploid) 2	121.732
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.144
	CNS0095607	Whole white alabastrum(tetraploid) 1	193.394
	CNS0095608	Whole white alabastrum(tetraploid) 2	206.486
	CNS0095609	Whole white alabastrum(tetraploid) 3	130.651
	CNS0095610	Silvery flower (tetraploid) 1	0.718
	CNS0095611	Silvery flower (tetraploid) 2	2.963
	CNS0095612	Silvery flower (tetraploid) 3	10.892
	CNS0095613	Golden flower (tetraploid) 1	0.622
	CNS0095614	Golden flower (tetraploid) 2	0.141
	CNS0095615	Golden flower (tetraploid) 3	5.308
CRA001975	CRR073297	Stem 1	33.286
	CRR073298	Stem 2	37.805
	CRR073299	Stem 3	23.395
	CRR073300	Leaf 1	80.614
	CRR073301	Leaf 2	74.578
	CRR073302	Leaf 3	49.899
	CRR073303	Juvenile bud 1	69.474
	CRR073304	Juvenile bud 2	67.165
	CRR073305	Juvenile bud 3	3.373
	CRR073306	Third green 1	16.153
	CRR073307	Third green 2	20.855
	CRR073308	Third green 3	14.998
	CRR073309	Second white 1	1.836
	CRR073310	Second white 2	2.788
	CRR073311	Second white 3	3.240
	CRR073312	Silver flowering 1	18.000
	CRR073313	Silver flowering 2	24.381
	CRR073314	Silver flowering 3	7.717
	CRR073315	Gold flowering 1	13.561
	CRR073316	Gold flowering 2	2.915
	CRR073317	Gold flowering 3	7.092
	CRR073318	Tawny withering 1	11.652
	CRR073319	Tawny withering 2	11.677
	CRR073320	Tawny withering 3	14.007