Gene detail

Detail information of GWHGAAZE033399

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002282966.2	1.4967E-135	PREDICTED: hydroxyethylthiazole kinase [Vitis vinifera]
COG	YP_004789054.1	7E-70	hydroxyethylthiazole kinase
Swissprot	tr\|Q9LIQ4\|THIM_ARATH	2E-123	Hydroxyethylthiazole kinase
trEMBL	tr\|F6HS46\|F6HS46_VITVI	6E-136	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB57505.1}
TAIR10	AT3G24030.1	1E-81	hydroxyethylthiazole kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000093	gene	365143	369825	-
GWHAAZE00000093	mRNA	365143	369825	-
GWHAAZE00000093	exon	365143	365535	-
GWHAAZE00000093	exon	369415	369825	-
GWHAAZE00000093	five_prime_UTR	369745	369825	-
GWHAAZE00000093	CDS	369415	369744	-
GWHAAZE00000093	CDS	365143	365535	-

Transcript Sequence
>GWHTAAZE033438 TGGGGCCCAAAATCATGGACCCTACTATCCACGTTGCGCCAACGATCACCGTTAATCCAATGCATCACCAACTTCGTGTCAATGGATCTGATGGCCAACACCCTCTTATCTGCTGGTGCATCGCCGGCCATGGTCCACTCTCTACAGGAAATCCCGGAGTTCACCCCTCTGACCCACGCGCTCTGCGTGAACGTGGGGACACTCACCTCTGAGTGGCTACCGGCTATGAAGGCAGCTGCCGAGTTGGCGGCTCAGTTGGGTAAGCCTTGGGTGCTGGACCCGGTTGCCGCCGGGGCTTCCCGTTTCCGGTTGAAGGCTTGTCTGGAGCTTGTTGGGCTGAAGCCTAGGGTTATTAGAGGGAATGGGTCTGAGATTATTGCTCTTTCCAGTGCTTCACTTGGATCCGGCAAGGGTGTGGATAGCTCGCGTGAATCCACGGACGCAGTCGAAGCAGCAAAGTCCTTGGCCAAATCGAGTGGCAGTATAGTTGCAGTTTCAGGGGCCGTTGACATTGTAACGGATGGTGATCGAGTGCTTGGTGCACAAAATGGGGTACCTATGATGCAAAAGATCACGGCCACCGGATGCTCAGTAACAGCCCTCATTGCGGCCTTTGTTGCCGTTGACCCGTTACACACATTTGAAGCCACTGTTATAGCATTGTCGATATTTGGTGTTGCTGGTGAGATAGGAATGGAAATGGCTAAAGGGCCTGCTTCATTGCGGATGCACTTGATCGATTCACTTTACGGGCTGGATGAGGCTGCCGTTCTTGAACGCGTTAAAATCACCCAGCTGTCATGA

Network for GWHGAAZE033399

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02110.16	HK	4	226	3.20E-63

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00878	thiM	Metabolic pathways	map01100
K00878	thiM	Thiamine metabolism	map00730

Gene Ontology

GO term	Ontology	Name
GO:0009228	biological_process	thiamine biosynthetic process
GO:0004417	molecular_function	hydroxyethylthiazole kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	24.036
	SRR3591706	second leaf	11.804
	SRR3591707	mature leaf	10.513
	SRR3591708	Shoot apex	19.587
	SRR3591709	Stem	19.834
	SRR3591710	White floral bud	14.396
	SRR3591711	White flower	16.401
	SRR3591712	Green floral bud	17.015
	SRR3591713	Yellow flower	9.519
SRP173429	SRR8316895	Juvenile bud stage	11.362
	SRR8316896	Juvenile bud stage	13.350
	SRR8316897	Juvenile bud stage	5.170
	SRR8316894	Third green stage	6.382
	SRR8316900	Third green stage	18.028
	SRR8316901	Third green stage	17.704
	SRR8316898	Complete white stage	6.829
	SRR8316899	Complete white stage	26.001
	SRR8316903	Complete white stage	9.727
	SRR8316902	Silver flowering stage	6.773
	SRR8316904	Silver flowering stage	7.694
	SRR8316905	Silver flowering stage	4.065
	SRR8316906	Gold flowering stage	13.798
	SRR8316907	Gold flowering stage	17.025
	SRR8316908	Gold flowering stage	14.456
SRP132670	SRR6706286	Control	13.509
	SRR6706287	Light intensity 50%	16.037
	SRR6706288	Light intensity 20%	16.348
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	17.633
	CNS0095593	Slightly white alabastrum(diploid) 2	17.510
	CNS0095594	Slightly white alabastrum(diploid) 3	19.153
	CNS0095595	Whole white alabastrum(diploid) 2	18.139
	CNS0095596	Whole white alabastrum(diploid) 3	16.257
	CNS0095597	Whole white alabastrum(diploid) 4	16.982
	CNS0095598	Silvery flower (diploied) 1	26.009
	CNS0095599	Silvery flower (diploied) 2	22.404
	CNS0095600	Silvery flower (diploied) 3	23.736
	CNS0095601	Golden flower (diploid) 1	23.142
	CNS0095602	Golden flower (diploid) 2	22.444
	CNS0095603	Golden flower (diploid) 3	22.665
	CNS0095604	Slightly white alabastrum(tetraploid) 1	17.670
	CNS0095605	Slightly white alabastrum(tetraploid) 2	19.922
	CNS0095606	Slightly white alabastrum(tetraploid) 3	34.502
	CNS0095607	Whole white alabastrum(tetraploid) 1	15.591
	CNS0095608	Whole white alabastrum(tetraploid) 2	12.822
	CNS0095609	Whole white alabastrum(tetraploid) 3	19.691
	CNS0095610	Silvery flower (tetraploid) 1	23.514
	CNS0095611	Silvery flower (tetraploid) 2	30.862
	CNS0095612	Silvery flower (tetraploid) 3	18.337
	CNS0095613	Golden flower (tetraploid) 1	17.820
	CNS0095614	Golden flower (tetraploid) 2	22.054
	CNS0095615	Golden flower (tetraploid) 3	10.410
CRA001975	CRR073297	Stem 1	18.851
	CRR073298	Stem 2	17.217
	CRR073299	Stem 3	30.683
	CRR073300	Leaf 1	18.403
	CRR073301	Leaf 2	22.231
	CRR073302	Leaf 3	26.424
	CRR073303	Juvenile bud 1	30.378
	CRR073304	Juvenile bud 2	24.300
	CRR073305	Juvenile bud 3	25.187
	CRR073306	Third green 1	7.216
	CRR073307	Third green 2	11.272
	CRR073308	Third green 3	11.697
	CRR073309	Second white 1	8.051
	CRR073310	Second white 2	7.180
	CRR073311	Second white 3	6.479
	CRR073312	Silver flowering 1	7.658
	CRR073313	Silver flowering 2	9.679
	CRR073314	Silver flowering 3	7.462
	CRR073315	Gold flowering 1	17.173
	CRR073316	Gold flowering 2	16.194
	CRR073317	Gold flowering 3	17.812
	CRR073318	Tawny withering 1	28.676
	CRR073319	Tawny withering 2	24.608
	CRR073320	Tawny withering 3	22.628