Gene detail

Detail information of GWHGAAZE033471

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002280241.2	0	PREDICTED: inositol-tetrakisphosphate 1-kinase 4 [Vitis vinifera]
Swissprot	tr\|O80568\|ITPK4_ARATH	2E-147	Inositol-tetrakisphosphate 1-kinase 4
trEMBL	tr\|D7T2M6\|D7T2M6_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI24757.3}
TAIR10	AT2G43980.1	5E-117	inositol 1,3,4-trisphosphate 5/6-kinase 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000104	gene	315202	331747	+
GWHAAZE00000104	mRNA	315202	331747	+
GWHAAZE00000104	exon	315202	315325	+
GWHAAZE00000104	exon	321859	321944	+
GWHAAZE00000104	exon	322495	322530	+
GWHAAZE00000104	exon	323833	324033	+
GWHAAZE00000104	exon	325420	325618	+
GWHAAZE00000104	exon	326165	326226	+
GWHAAZE00000104	exon	326860	326928	+
GWHAAZE00000104	exon	327368	327570	+
GWHAAZE00000104	exon	328890	328989	+
GWHAAZE00000104	exon	329368	329481	+
GWHAAZE00000104	exon	330265	330327	+
GWHAAZE00000104	exon	330515	330660	+
GWHAAZE00000104	exon	331011	331143	+
GWHAAZE00000104	exon	331580	331747	+
GWHAAZE00000104	CDS	315202	315325	+
GWHAAZE00000104	CDS	321859	321944	+
GWHAAZE00000104	CDS	322495	322530	+
GWHAAZE00000104	CDS	323833	324033	+
GWHAAZE00000104	CDS	325420	325618	+
GWHAAZE00000104	CDS	326165	326226	+
GWHAAZE00000104	CDS	326860	326928	+
GWHAAZE00000104	CDS	327368	327570	+
GWHAAZE00000104	CDS	328890	328989	+
GWHAAZE00000104	CDS	329368	329481	+
GWHAAZE00000104	CDS	330265	330327	+
GWHAAZE00000104	CDS	330515	330660	+
GWHAAZE00000104	CDS	331011	331143	+
GWHAAZE00000104	CDS	331580	331747	+

Transcript Sequence
>GWHTAAZE033510 ATGACTCCCATGTTCGTCGGCCATATTGGAGATATTGAGCTCTCCGCTGTTTCTATTGCTAGCTCTGCTATTAGTACTTTCTCTTTTGGCTTCTTGGTGGGGGAGAAGAGAGAGAGAGAGGAAGGAGTGGAAAATGATGCCGGGCGTCTTTCTCTTCGACCTGGAGCTGAGTATCTCTTTCAAAAGCTTCATCACTCCAACATCCCTACGGGAATATCTTATGGGCCTGGTCTTTCATCTCCCGAGACACAACTCCCTTTGTTTCATCTATGTAAAAGTTTGATTGTCTCTATTTGGGATGGGATTATATCTGTTGGTCCAGATTTCATTTCTCATTGCAAGCGATTCAATATATCAACACTGAGTTGCCCTGAGTCAATCCCCACGGTTGTGATGGAACCTGGTGTTGGTAATCAAGAGCAACCGTTTGATTCTCAAGATTTAAAGGTGGGTTTTCTTGAAAGGATGGCAAGTCTGTACTCGTTTAGGTGTTTCATCCTGAATCCATCTTCCATTGACGACACTGTGAATGAGGTTGCACTATCTTGGAGTGATAATGGAGGGAGTTTTTTGCATGTAGTATCTAACAATAACGAGGAATTGTCTCTTAAACTTCAGGATCATGGCTGGACGATTGTCATCCTAAATGTTGAAGGTGGTGGGGCAAGAGAGAATTCAAGAGTGATTCTAATAGACAAACTGGAAGAGGCAGCAGGCAAGGATAATGTGATGGTTGGCTATATTATGAAGCCTTCTCGGGAAGAAGATTTTGCTAAGAGAGGTGCATTTCCCTTGTATCCTACTGAAAATGGTTTGATATTTGTGCCCCTTACGTTTGAGCTCTCCATACGCTCCCAATTGCAAAAAGTCGATGTAGTCCTCCATAAAGCGACTGATGAAATTATCTCAGTTGAACTGAGCAGTTCTTCTGATTTCTCCAGTAAAGTTGTCTATACCAGCGGCATGCAGGAGTTACAAAGGTGTATTGAACAACAACCAGATTGCTGTGTAATTGATCCTTTTATCAGCATTTACCCTGTACTGGATCGATTGAAAATCCAACAGATTCTACTTAGTTTGGTTGATAACTTTAATGAGCCCAATTTGGCAGAAAGGTTATTAGAAGCTAAATTATATCCTCCAAGTATAGTAAAACCTCAAGTTGCATGTGGTGTAGCTGATGCTCACAGTATGGCTATTGTCTTCAGAGTTGATGATTACATGGATTTGAATGTTCCTCTTCCCGCAATTGTGCAGGAATATGTGGATCATTCGTCTACTCTGTTCAAATTTTATGTGTTGGGAGATAAGGTGTTCTATGCAGTTAAAAAGTCTACTCCAAATGCCGATATCTTAACAAAGCTAAGCGAAAGAAATGGACTCAAGCCTTTACTCTTTGATAGCTTGAAATCTCTACCAACTGCTCAAGATGGCCAAAAGGAAAGTGATGAGCATGTTGACGTTGGTCTGGTGACTGATGCTGCATCGTGGCTTAGGAAGATGCTTGACCTTACAATCTTTGGCTTTGATGTTGTTATACAAGAAGGAAGTGGTGATCATGTGATTGTGGATGTAAATTACTTGCCATCATTCAAAGAAGTAGCTGATGATGTCGCAATACCTGCCTTTTGGGAAGCTATCAAGATCAAATATGACAACCACCACTCCACAACTGCAACAACAAACACAATCAAACACCACTAG

Network for GWHGAAZE033471

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05770.12	Ins134_P3_kin	369	535	2.80E-23

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01765	ITPK4	Metabolic pathways	map01100
K01765	ITPK4	Inositol phosphate metabolism	map00562

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	38.800
	SRR3591706	second leaf	20.409
	SRR3591707	mature leaf	19.169
	SRR3591708	Shoot apex	33.139
	SRR3591709	Stem	48.471
	SRR3591710	White floral bud	27.762
	SRR3591711	White flower	33.089
	SRR3591712	Green floral bud	33.911
	SRR3591713	Yellow flower	30.735
SRP173429	SRR8316895	Juvenile bud stage	23.973
	SRR8316896	Juvenile bud stage	39.425
	SRR8316897	Juvenile bud stage	14.782
	SRR8316894	Third green stage	13.566
	SRR8316900	Third green stage	32.725
	SRR8316901	Third green stage	33.237
	SRR8316898	Complete white stage	11.963
	SRR8316899	Complete white stage	29.694
	SRR8316903	Complete white stage	19.069
	SRR8316902	Silver flowering stage	11.862
	SRR8316904	Silver flowering stage	19.076
	SRR8316905	Silver flowering stage	7.897
	SRR8316906	Gold flowering stage	28.546
	SRR8316907	Gold flowering stage	27.225
	SRR8316908	Gold flowering stage	27.302
SRP132670	SRR6706286	Control	7.026
	SRR6706287	Light intensity 50%	7.599
	SRR6706288	Light intensity 20%	8.440
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	27.198
	CNS0095593	Slightly white alabastrum(diploid) 2	29.579
	CNS0095594	Slightly white alabastrum(diploid) 3	29.409
	CNS0095595	Whole white alabastrum(diploid) 2	24.507
	CNS0095596	Whole white alabastrum(diploid) 3	19.640
	CNS0095597	Whole white alabastrum(diploid) 4	24.776
	CNS0095598	Silvery flower (diploied) 1	27.550
	CNS0095599	Silvery flower (diploied) 2	24.634
	CNS0095600	Silvery flower (diploied) 3	26.182
	CNS0095601	Golden flower (diploid) 1	26.631
	CNS0095602	Golden flower (diploid) 2	24.048
	CNS0095603	Golden flower (diploid) 3	26.452
	CNS0095604	Slightly white alabastrum(tetraploid) 1	30.077
	CNS0095605	Slightly white alabastrum(tetraploid) 2	23.706
	CNS0095606	Slightly white alabastrum(tetraploid) 3	33.222
	CNS0095607	Whole white alabastrum(tetraploid) 1	25.075
	CNS0095608	Whole white alabastrum(tetraploid) 2	22.121
	CNS0095609	Whole white alabastrum(tetraploid) 3	28.982
	CNS0095610	Silvery flower (tetraploid) 1	34.795
	CNS0095611	Silvery flower (tetraploid) 2	28.406
	CNS0095612	Silvery flower (tetraploid) 3	29.481
	CNS0095613	Golden flower (tetraploid) 1	25.120
	CNS0095614	Golden flower (tetraploid) 2	31.492
	CNS0095615	Golden flower (tetraploid) 3	18.964
CRA001975	CRR073297	Stem 1	19.434
	CRR073298	Stem 2	16.944
	CRR073299	Stem 3	12.200
	CRR073300	Leaf 1	16.070
	CRR073301	Leaf 2	12.923
	CRR073302	Leaf 3	11.023
	CRR073303	Juvenile bud 1	10.860
	CRR073304	Juvenile bud 2	7.869
	CRR073305	Juvenile bud 3	11.569
	CRR073306	Third green 1	2.571
	CRR073307	Third green 2	1.937
	CRR073308	Third green 3	5.459
	CRR073309	Second white 1	6.143
	CRR073310	Second white 2	6.677
	CRR073311	Second white 3	6.658
	CRR073312	Silver flowering 1	5.182
	CRR073313	Silver flowering 2	4.782
	CRR073314	Silver flowering 3	4.458
	CRR073315	Gold flowering 1	7.490
	CRR073316	Gold flowering 2	11.161
	CRR073317	Gold flowering 3	5.713
	CRR073318	Tawny withering 1	14.719
	CRR073319	Tawny withering 2	21.414
	CRR073320	Tawny withering 3	17.212