Detail information of GWHGAAZE033524


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011071390.11.3943E-123PREDICTED: seed maturation protein PM36 [Sesamum indicum]
COGYP_007079140.12E-29transcription activator
Swissprottr|Q9SWB6|PM36_SOYBN5E-112Seed maturation protein PM36
trEMBLtr|F6H731|F6H731_VITVI4E-120Putative uncharacterized protein {ECO:0000313|EMBL:CCB47978.1}
TAIR10AT3G16990.17E-81Haem oxygenase-like, multi-helical

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000104gene16604361663357-
GWHAAZE00000104mRNA16604361663357-
GWHAAZE00000104exon16604361660742-
GWHAAZE00000104exon16615671661784-
GWHAAZE00000104exon16631901663357-
GWHAAZE00000104CDS16631901663357-
GWHAAZE00000104CDS16615671661784-
GWHAAZE00000104CDS16604361660742-
Transcript Sequence

Network for GWHGAAZE033524

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03070.17TENA_THI-4242293.50E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20896TENA_E Metabolic pathways map01100
Thiamine metabolismmap00730

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf45.929
SRR3591706second leaf46.460
SRR3591707mature leaf52.951
SRR3591708Shoot apex46.078
SRR3591709Stem55.736
SRR3591710White floral bud73.250
SRR3591711White flower64.377
SRR3591712Green floral bud79.770
SRR3591713Yellow flower51.433
SRP173429 SRR8316895Juvenile bud stage 23.233
SRR8316896Juvenile bud stage 25.057
SRR8316897Juvenile bud stage 11.727
SRR8316894Third green stage 13.394
SRR8316900Third green stage 39.110
SRR8316901Third green stage 38.200
SRR8316898Complete white stage 23.051
SRR8316899Complete white stage 53.475
SRR8316903Complete white stage 29.122
SRR8316902Silver flowering stage20.480
SRR8316904Silver flowering stage29.691
SRR8316905Silver flowering stage15.640
SRR8316906Gold flowering stage 39.670
SRR8316907Gold flowering stage 40.266
SRR8316908Gold flowering stage 37.536
SRP132670SRR6706286Control10.756
SRR6706287Light intensity 50%11.361
SRR6706288Light intensity 20%14.200
CNP0000432CNS0095592Slightly white alabastrum(diploid) 131.739
CNS0095593Slightly white alabastrum(diploid) 235.529
CNS0095594Slightly white alabastrum(diploid) 331.430
CNS0095595Whole white alabastrum(diploid) 242.500
CNS0095596Whole white alabastrum(diploid) 337.462
CNS0095597Whole white alabastrum(diploid) 434.806
CNS0095598Silvery flower (diploied) 145.724
CNS0095599Silvery flower (diploied) 233.848
CNS0095600Silvery flower (diploied) 358.206
CNS0095601Golden flower (diploid) 133.817
CNS0095602Golden flower (diploid) 249.624
CNS0095603Golden flower (diploid) 347.337
CNS0095604Slightly white alabastrum(tetraploid) 145.047
CNS0095605Slightly white alabastrum(tetraploid) 242.669
CNS0095606Slightly white alabastrum(tetraploid) 352.784
CNS0095607Whole white alabastrum(tetraploid) 133.658
CNS0095608Whole white alabastrum(tetraploid) 233.797
CNS0095609Whole white alabastrum(tetraploid) 346.143
CNS0095610Silvery flower (tetraploid) 164.176
CNS0095611Silvery flower (tetraploid) 273.501
CNS0095612Silvery flower (tetraploid) 374.587
CNS0095613Golden flower (tetraploid) 154.528
CNS0095614Golden flower (tetraploid) 270.366
CNS0095615Golden flower (tetraploid) 335.731
CRA001975CRR073297Stem 16.838
CRR073298Stem 27.550
CRR073299Stem 36.515
CRR073300Leaf 19.849
CRR073301Leaf 28.972
CRR073302Leaf 39.153
CRR073303Juvenile bud 18.487
CRR073304Juvenile bud 26.715
CRR073305Juvenile bud 36.729
CRR073306Third green 17.407
CRR073307Third green 27.463
CRR073308Third green 35.436
CRR073309Second white 113.609
CRR073310Second white 29.813
CRR073311Second white 311.594
CRR073312Silver flowering 15.656
CRR073313Silver flowering 25.230
CRR073314Silver flowering 34.709
CRR073315Gold flowering 17.877
CRR073316Gold flowering 29.885
CRR073317Gold flowering 35.609
CRR073318Tawny withering 17.498
CRR073319Tawny withering 28.591
CRR073320Tawny withering 37.946