Detail information of GWHGAAZE033549


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002268176.10PREDICTED: putative glucose-6-phosphate 1-epimerase [Vitis vinifera]
COGYP_002355684.11E-64aldose 1-epimerase
Swissprottr|Q40784|AAPC_CENCI0Putative glucose-6-phosphate 1-epimerase
trEMBLtr|D7SQC7|D7SQC7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI17858.3}
TAIR10AT5G57330.12E-151Galactose mutarotase-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000108gene11556121170108-
GWHAAZE00000108mRNA11556121170108-
GWHAAZE00000108exon11556121155700-
GWHAAZE00000108exon11578171158076-
GWHAAZE00000108exon11587351158834-
GWHAAZE00000108exon11589241159026-
GWHAAZE00000108exon11604551160595-
GWHAAZE00000108exon11607631160923-
GWHAAZE00000108exon11610051161061-
GWHAAZE00000108exon11666731166747-
GWHAAZE00000108exon11699561170108-
GWHAAZE00000108five_prime_UTR11700641170108-
GWHAAZE00000108CDS11699561170063-
GWHAAZE00000108CDS11666731166747-
GWHAAZE00000108CDS11610051161061-
GWHAAZE00000108CDS11607631160923-
GWHAAZE00000108CDS11604551160595-
GWHAAZE00000108CDS11589241159026-
GWHAAZE00000108CDS11587351158834-
GWHAAZE00000108CDS11578621158076-
GWHAAZE00000108three_prime_UTR11578171157861-
GWHAAZE00000108three_prime_UTR11556121155700-
Transcript Sequence

Network for GWHGAAZE033549

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01263.21Aldose_epim252982.10E-71
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01792E5.1.3.15 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Glycolysis / Gluconeogenesismap00010

Gene Ontology

GO term OntologyName
GO:0005975biological_processcarbohydrate metabolic process
GO:0003824molecular_functioncatalytic activity
GO:0030246molecular_functioncarbohydrate binding
GO:0016853molecular_functionisomerase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf121.051
SRR3591706second leaf68.288
SRR3591707mature leaf58.987
SRR3591708Shoot apex94.242
SRR3591709Stem120.278
SRR3591710White floral bud102.563
SRR3591711White flower116.085
SRR3591712Green floral bud115.518
SRR3591713Yellow flower130.186
SRP173429 SRR8316895Juvenile bud stage 74.564
SRR8316896Juvenile bud stage 114.167
SRR8316897Juvenile bud stage 53.694
SRR8316894Third green stage 43.556
SRR8316900Third green stage 137.729
SRR8316901Third green stage 137.686
SRR8316898Complete white stage 47.147
SRR8316899Complete white stage 131.495
SRR8316903Complete white stage 86.205
SRR8316902Silver flowering stage57.838
SRR8316904Silver flowering stage71.359
SRR8316905Silver flowering stage34.538
SRR8316906Gold flowering stage 117.723
SRR8316907Gold flowering stage 119.477
SRR8316908Gold flowering stage 126.110
SRP132670SRR6706286Control97.202
SRR6706287Light intensity 50%99.758
SRR6706288Light intensity 20%106.723
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1112.423
CNS0095593Slightly white alabastrum(diploid) 2114.939
CNS0095594Slightly white alabastrum(diploid) 3123.333
CNS0095595Whole white alabastrum(diploid) 2111.121
CNS0095596Whole white alabastrum(diploid) 3118.992
CNS0095597Whole white alabastrum(diploid) 4107.673
CNS0095598Silvery flower (diploied) 189.913
CNS0095599Silvery flower (diploied) 2105.350
CNS0095600Silvery flower (diploied) 3131.460
CNS0095601Golden flower (diploid) 1113.729
CNS0095602Golden flower (diploid) 2124.972
CNS0095603Golden flower (diploid) 3122.133
CNS0095604Slightly white alabastrum(tetraploid) 1139.129
CNS0095605Slightly white alabastrum(tetraploid) 2121.484
CNS0095606Slightly white alabastrum(tetraploid) 3146.741
CNS0095607Whole white alabastrum(tetraploid) 1105.179
CNS0095608Whole white alabastrum(tetraploid) 2113.625
CNS0095609Whole white alabastrum(tetraploid) 3147.741
CNS0095610Silvery flower (tetraploid) 1143.656
CNS0095611Silvery flower (tetraploid) 2144.029
CNS0095612Silvery flower (tetraploid) 3150.388
CNS0095613Golden flower (tetraploid) 1104.636
CNS0095614Golden flower (tetraploid) 2148.750
CNS0095615Golden flower (tetraploid) 3103.957
CRA001975CRR073297Stem 196.828
CRR073298Stem 297.015
CRR073299Stem 394.137
CRR073300Leaf 1112.359
CRR073301Leaf 2104.844
CRR073302Leaf 399.397
CRR073303Juvenile bud 193.324
CRR073304Juvenile bud 289.580
CRR073305Juvenile bud 380.840
CRR073306Third green 154.348
CRR073307Third green 250.328
CRR073308Third green 354.539
CRR073309Second white 145.840
CRR073310Second white 261.934
CRR073311Second white 355.559
CRR073312Silver flowering 151.846
CRR073313Silver flowering 231.756
CRR073314Silver flowering 358.610
CRR073315Gold flowering 134.633
CRR073316Gold flowering 254.808
CRR073317Gold flowering 327.401
CRR073318Tawny withering 194.432
CRR073319Tawny withering 295.448
CRR073320Tawny withering 388.920