Gene detail

Detail information of GWHGAAZE033576

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006438479.1	0	hypothetical protein CICLE_v10031201mg [Citrus clementina]
COG	YP_004958904.1	4E-10	MGT family glycosyltransferase
Swissprot	tr\|O48676\|U74B1_ARATH	2E-169	UDP-glycosyltransferase 74B1
trEMBL	tr\|V4VGS0\|V4VGS0_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR51719.1}
TAIR10	AT1G24100.1	2E-134	UDP-glucosyl transferase 74B1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000108	gene	2480224	2481685	+
GWHAAZE00000108	mRNA	2480224	2481685	+
GWHAAZE00000108	exon	2480224	2480868	+
GWHAAZE00000108	exon	2480948	2481685	+
GWHAAZE00000108	CDS	2480224	2480868	+
GWHAAZE00000108	CDS	2480948	2481685	+

Transcript Sequence
>GWHTAAZE033615 ATGGAAGAACCACCAAAATATGAAGCCCATGTAATTGTAATCCCTTACCCAAGCCAAGGTCACATCAACCCTCTCCTCCAATTTGCAAAACGCCTTGCCTCCAAAGGGCTCAAAGCTACACTAGCCACCACCCCCTACATTCTTAACTCCATTTCTGCACCGAACGTTGGGGTCGAGCCCATCTCCGATGGCTTCGATCAAGGCGGCTTCGCTCAAGCCCAAAACGAGGAGGTCTACCTCAAGGCATTCAAAGCTAATGGCTCGAAAACCCTCTCTCAACTCATCCACAAGTACCAAAACTCAAACTCTCCTATCAATTGTGTTGTCTACGATTCATTTTTACCGTGGGCCCTCAACGTTGCTAAGGAACACGGCATCCTCGGAGCTTCGTTCTTCACAAACTCAGCTACGGTTTGCGCTATATTCTGCCGCATTCACCACGGCATGCTGACTTTGCCCGTGAAAATGGAACACGTACCCTTGGTTTTGCCTGGTGTGCCTCCATTGGACATCAGGGACCTGCCTAGCTTTCTAAAGGCACCCGAAAGCTACCCTGCTTACTTGGCAATGAAGTTGAACCAGTATGCTAACTTGGAAAAGGCTGACTGGATATTTGGGAACACCTTTGAAGCATTAGAGGGAAAGGCGGCGAAAGGAATATCAGAGCTCTGGCCAGGAAAAATGATAGGTCCAATGGTGCCATCAGCATACTTGGATGGGCGAATAACGGGAGACAAAGCATACGGAGCGAGCCTATGGAAGCCATTTATCAAAGAGAGCATCGAATGGCTTGAAACAAAACCATGCAAGTCAGTAGTATACATCTCTTTTGGAAGTATGGTCAAATTGACAGCAGAACAGATGGAAGAAATCGCATGGGGATTGAAGGATAGTAGTTTCAATTTCCTTTGGGTGGTCAAGGAGTCCGAGAGTGGTAATCTGCCCGATGGGTTTGAAGAATTGACAAAAGAGAAGGGCCGCATAGTGACATGGTGTAACCAACTAGAGACGCTGGCTCACCAAGCCATAGGTTGCTTTGTAACGCATTGCGGGTGGAACTCTACGCTTGAAGGATTGTGCCTTGGGGTGCCAATGGTTGGGGTGCCACAGTGGGCTGACCAGTTGACTGATGCTAAGTTTATAGAGGATGTGTGGAGAGTGGGCGTTAGAGCAGCGGAGGATGAGAAGGGGATTGTGAGGAGAGAAGAGATTGTCTTGTGTTTGAAGAAAGTGATGGAAGGAGAGAGAAGTCATGAGATTAGGAGGAATGCTAGTAGATGGCGGGAGTTGTCTAACGAGGCAATCAGTGAAGGAGGGAGCTCAGATGATTGCATTAATGAATTTGCCAACTATTTGATGTGTAGCACATTAACAAGAAATTAA

Network for GWHGAAZE033576

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00201.19	UDPGT	253	415	1.00E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K11820	UGT74B1	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		2-Oxocarboxylic acid metabolism	map01210
		Tryptophan metabolism	map00380
		Glucosinolate biosynthesis	map00966

Gene Ontology

GO term	Ontology	Name
GO:0016758	molecular_function	transferase activity, transferring hexosyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	9.524
	SRR3591706	second leaf	4.462
	SRR3591707	mature leaf	1.488
	SRR3591708	Shoot apex	3.976
	SRR3591709	Stem	13.368
	SRR3591710	White floral bud	8.132
	SRR3591711	White flower	3.832
	SRR3591712	Green floral bud	0.744
	SRR3591713	Yellow flower	0.574
SRP173429	SRR8316895	Juvenile bud stage	0.887
	SRR8316896	Juvenile bud stage	0.302
	SRR8316897	Juvenile bud stage	0.157
	SRR8316894	Third green stage	0.436
	SRR8316900	Third green stage	1.276
	SRR8316901	Third green stage	1.327
	SRR8316898	Complete white stage	1.749
	SRR8316899	Complete white stage	0.376
	SRR8316903	Complete white stage	1.481
	SRR8316902	Silver flowering stage	1.300
	SRR8316904	Silver flowering stage	3.686
	SRR8316905	Silver flowering stage	0.713
	SRR8316906	Gold flowering stage	1.658
	SRR8316907	Gold flowering stage	1.110
	SRR8316908	Gold flowering stage	0.693
SRP132670	SRR6706286	Control	0.784
	SRR6706287	Light intensity 50%	1.177
	SRR6706288	Light intensity 20%	1.251
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.134
	CNS0095593	Slightly white alabastrum(diploid) 2	1.382
	CNS0095594	Slightly white alabastrum(diploid) 3	0.896
	CNS0095595	Whole white alabastrum(diploid) 2	0.748
	CNS0095596	Whole white alabastrum(diploid) 3	0.581
	CNS0095597	Whole white alabastrum(diploid) 4	0.954
	CNS0095598	Silvery flower (diploied) 1	1.043
	CNS0095599	Silvery flower (diploied) 2	1.759
	CNS0095600	Silvery flower (diploied) 3	0.599
	CNS0095601	Golden flower (diploid) 1	0.690
	CNS0095602	Golden flower (diploid) 2	1.314
	CNS0095603	Golden flower (diploid) 3	0.946
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	1.202
	CRR073298	Stem 2	0.736
	CRR073299	Stem 3	0.645
	CRR073300	Leaf 1	0.951
	CRR073301	Leaf 2	1.073
	CRR073302	Leaf 3	0.262
	CRR073303	Juvenile bud 1	0.183
	CRR073304	Juvenile bud 2	1.070
	CRR073305	Juvenile bud 3	1.142
	CRR073306	Third green 1	16.182
	CRR073307	Third green 2	12.226
	CRR073308	Third green 3	16.780
	CRR073309	Second white 1	0.181
	CRR073310	Second white 2	0.729
	CRR073311	Second white 3	0.936
	CRR073312	Silver flowering 1	0.411
	CRR073313	Silver flowering 2	0.558
	CRR073314	Silver flowering 3	0.649
	CRR073315	Gold flowering 1	0.152
	CRR073316	Gold flowering 2	0.073
	CRR073317	Gold flowering 3	0.271
	CRR073318	Tawny withering 1	4.099
	CRR073319	Tawny withering 2	5.000
	CRR073320	Tawny withering 3	6.409