Detail information of GWHGAAZE033621


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006477925.14.814E-135PREDICTED: coiled-coil domain-containing protein 94 homolog [Citrus sinensis]
trEMBLtr|V4VR37|V4VR37_9ROSI7E-135Uncharacterized protein {ECO:0000313|EMBL:ESR55489.1}
TAIR10AT1G17130.13E-100Family of unknown function (DUF572)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000108gene42841494287731-
GWHAAZE00000108mRNA42841494287731-
GWHAAZE00000108exon42875344287731-
GWHAAZE00000108exon42860604286209-
GWHAAZE00000108exon42858244285943-
GWHAAZE00000108exon42856424285707-
GWHAAZE00000108exon42848824284932-
GWHAAZE00000108exon42844294284486-
GWHAAZE00000108exon42841494284312-
GWHAAZE00000108CDS42875344287731-
GWHAAZE00000108CDS42860604286209-
GWHAAZE00000108CDS42858244285943-
GWHAAZE00000108CDS42856424285707-
GWHAAZE00000108CDS42848824284932-
GWHAAZE00000108CDS42844294284486-
GWHAAZE00000108CDS42841494284312-
Transcript Sequence

Network for GWHGAAZE033621

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0158


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04502.14DUF57292573.10E-86
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.978
SRR3591706second leaf24.321
SRR3591707mature leaf23.022
SRR3591708Shoot apex31.027
SRR3591709Stem32.724
SRR3591710White floral bud60.156
SRR3591711White flower61.919
SRR3591712Green floral bud41.605
SRR3591713Yellow flower67.510
SRP173429 SRR8316895Juvenile bud stage 10.432
SRR8316896Juvenile bud stage 15.470
SRR8316897Juvenile bud stage 12.553
SRR8316894Third green stage 7.705
SRR8316900Third green stage 18.219
SRR8316901Third green stage 18.777
SRR8316898Complete white stage 14.424
SRR8316899Complete white stage 30.806
SRR8316903Complete white stage 16.924
SRR8316902Silver flowering stage12.447
SRR8316904Silver flowering stage16.374
SRR8316905Silver flowering stage7.018
SRR8316906Gold flowering stage 29.962
SRR8316907Gold flowering stage 24.123
SRR8316908Gold flowering stage 36.433
SRP132670SRR6706286Control24.462
SRR6706287Light intensity 50%21.531
SRR6706288Light intensity 20%22.573
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.613
CNS0095593Slightly white alabastrum(diploid) 210.599
CNS0095594Slightly white alabastrum(diploid) 310.106
CNS0095595Whole white alabastrum(diploid) 210.918
CNS0095596Whole white alabastrum(diploid) 311.258
CNS0095597Whole white alabastrum(diploid) 411.519
CNS0095598Silvery flower (diploied) 113.821
CNS0095599Silvery flower (diploied) 211.574
CNS0095600Silvery flower (diploied) 318.930
CNS0095601Golden flower (diploid) 113.372
CNS0095602Golden flower (diploid) 215.037
CNS0095603Golden flower (diploid) 317.732
CNS0095604Slightly white alabastrum(tetraploid) 10.542
CNS0095605Slightly white alabastrum(tetraploid) 20.224
CNS0095606Slightly white alabastrum(tetraploid) 30.667
CNS0095607Whole white alabastrum(tetraploid) 10.011
CNS0095608Whole white alabastrum(tetraploid) 20.430
CNS0095609Whole white alabastrum(tetraploid) 30.220
CNS0095610Silvery flower (tetraploid) 11.575
CNS0095611Silvery flower (tetraploid) 20.737
CNS0095612Silvery flower (tetraploid) 30.493
CNS0095613Golden flower (tetraploid) 11.158
CNS0095614Golden flower (tetraploid) 20.978
CNS0095615Golden flower (tetraploid) 30.972
CRA001975CRR073297Stem 116.311
CRR073298Stem 215.086
CRR073299Stem 312.617
CRR073300Leaf 117.067
CRR073301Leaf 214.724
CRR073302Leaf 310.750
CRR073303Juvenile bud 112.855
CRR073304Juvenile bud 210.699
CRR073305Juvenile bud 313.787
CRR073306Third green 110.037
CRR073307Third green 211.576
CRR073308Third green 310.710
CRR073309Second white 18.829
CRR073310Second white 29.039
CRR073311Second white 38.882
CRR073312Silver flowering 15.800
CRR073313Silver flowering 24.094
CRR073314Silver flowering 36.687
CRR073315Gold flowering 18.650
CRR073316Gold flowering 212.346
CRR073317Gold flowering 38.324
CRR073318Tawny withering 19.335
CRR073319Tawny withering 210.937
CRR073320Tawny withering 310.960