Detail information of GWHGAAZE033652


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrADD31287.11.6308E-118NADH-plastoquinone oxidoreductase subunit I protein (chloroplast) [Lonicera japonica]
COGYP_007107609.12E-81NADH-plastoquinone oxidoreductase, I subunit
Swissprottr|Q8HVM2|NDHI_PSIGN4E-115NAD(P)H-quinone oxidoreductase subunit I, chloroplastic {ECO:0000255|HAMAP-Rule:MF_01351}
trEMBLtr|D3WBP5|D3WBP5_LONJA6E-119NAD(P)H-quinone oxidoreductase subunit I, chloroplastic {ECO:0000256|HAMAP-Rule:MF_01351, ECO:0000256|SAAS:SAAS00064212}
TAIR10ATCG01090.13E-85NADPH dehydrogenases

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000106gene4870149198+
GWHAAZE00000106mRNA4870149198+
GWHAAZE00000106exon4870149198+
GWHAAZE00000106CDS4870149198+
Transcript Sequence

Network for GWHGAAZE033652

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13187.7Fer4_9631184.10E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05580ndhI Metabolic pathways map01100
Oxidative phosphorylationmap00190

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016020cellular_componentmembrane
GO:0016651molecular_functionoxidoreductase activity, acting on NAD(P)H
GO:0051539molecular_function4 iron, 4 sulfur cluster binding
GO:0008137molecular_functionNADH dehydrogenase (ubiquinone) activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.388
SRR3591706second leaf3.437
SRR3591707mature leaf1.940
SRR3591708Shoot apex1.137
SRR3591709Stem0.392
SRR3591710White floral bud0.111
SRR3591711White flower0.050
SRR3591712Green floral bud0.398
SRR3591713Yellow flower0.324
SRP173429 SRR8316895Juvenile bud stage 5.074
SRR8316896Juvenile bud stage 2.236
SRR8316897Juvenile bud stage 9.704
SRR8316894Third green stage 9.652
SRR8316900Third green stage 0.701
SRR8316901Third green stage 0.847
SRR8316898Complete white stage 1.294
SRR8316899Complete white stage 0.493
SRR8316903Complete white stage 1.261
SRR8316902Silver flowering stage3.568
SRR8316904Silver flowering stage3.643
SRR8316905Silver flowering stage2.599
SRR8316906Gold flowering stage 0.532
SRR8316907Gold flowering stage 0.024
SRR8316908Gold flowering stage 0.262
SRP132670SRR6706286Control0.132
SRR6706287Light intensity 50%0.141
SRR6706288Light intensity 20%0.188
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.677
CNS0095593Slightly white alabastrum(diploid) 20.915
CNS0095594Slightly white alabastrum(diploid) 33.525
CNS0095595Whole white alabastrum(diploid) 22.767
CNS0095596Whole white alabastrum(diploid) 33.926
CNS0095597Whole white alabastrum(diploid) 44.437
CNS0095598Silvery flower (diploied) 11.991
CNS0095599Silvery flower (diploied) 22.034
CNS0095600Silvery flower (diploied) 31.529
CNS0095601Golden flower (diploid) 12.023
CNS0095602Golden flower (diploid) 21.068
CNS0095603Golden flower (diploid) 31.053
CNS0095604Slightly white alabastrum(tetraploid) 13.003
CNS0095605Slightly white alabastrum(tetraploid) 21.971
CNS0095606Slightly white alabastrum(tetraploid) 31.199
CNS0095607Whole white alabastrum(tetraploid) 11.197
CNS0095608Whole white alabastrum(tetraploid) 21.736
CNS0095609Whole white alabastrum(tetraploid) 31.156
CNS0095610Silvery flower (tetraploid) 11.259
CNS0095611Silvery flower (tetraploid) 21.078
CNS0095612Silvery flower (tetraploid) 31.108
CNS0095613Golden flower (tetraploid) 11.121
CNS0095614Golden flower (tetraploid) 21.255
CNS0095615Golden flower (tetraploid) 31.502
CRA001975CRR073297Stem 11.632
CRR073298Stem 21.570
CRR073299Stem 30.555
CRR073300Leaf 10.878
CRR073301Leaf 20.997
CRR073302Leaf 30.433
CRR073303Juvenile bud 10.694
CRR073304Juvenile bud 20.622
CRR073305Juvenile bud 30.576
CRR073306Third green 10.496
CRR073307Third green 20.004
CRR073308Third green 30.673
CRR073309Second white 10.126
CRR073310Second white 22.163
CRR073311Second white 33.068
CRR073312Silver flowering 11.221
CRR073313Silver flowering 20.912
CRR073314Silver flowering 31.519
CRR073315Gold flowering 12.623
CRR073316Gold flowering 25.911
CRR073317Gold flowering 32.534
CRR073318Tawny withering 11.638
CRR073319Tawny withering 20.439
CRR073320Tawny withering 30.056