Gene detail

Detail information of GWHGAAZE033793

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AHF22089.1	4.4896E-140	CYP79D33 [Maesa lanceolata]
Swissprot	tr\|Q6J541\|C79D3_LOTJA	3E-127	Isoleucine N-monooxygenase 1
trEMBL	tr\|B9H2J6\|B9H2J6_POPTR	7E-128	Cytochrome P450 79B2 family protein {ECO:0000313\|EMBL:EEE85592.2}
TAIR10	AT4G39950.1	5E-93	cytochrome P450, family 79, subfamily B, polypeptide 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000138	gene	326828	327876	+
GWHAAZE00000138	mRNA	326828	327876	+
GWHAAZE00000138	exon	326828	327691	+
GWHAAZE00000138	exon	327781	327876	+
GWHAAZE00000138	CDS	326828	327691	+
GWHAAZE00000138	CDS	327781	327876	+

Transcript Sequence
>GWHTAAZE033833 ATGTACTTGTTACGAAAAAGGTCAAACCTCCCACCAGGCCCCATGGGATGGCCTATTATCGGGAGCCTACACGTATTGTTTACATGCAAGCCTATATTTCGATGGATTCATAGGCTCATGCATGAGATGAATACAGAAATCATATGTGTCCGCTTCCTAAACACCCATGTCATTGTTGTGTCTAGCGATGATTTGGCAAAAGAGTTCTTAAAGACACAAGACGCCGTGTTTTCTTCAAGACCTATTTCTTTAGCTTCTGAAATCACCAGTGGTGGATACATGGCAACTATCTTTAGTCCAATGGGAGAGCAATGGAAAAAAATGAGGAGAATCCTTGCCACTGAAATCCTTTCCAAGAATAGACACAAGTGGCTTCTGAACAAGAGAAATGAAGAGGCCGACTACTTAGTCCACCATGTCTACAACCAAGCATGTAGCAACTTGACTGGGGGAATTGTCAATGTGAGGGTCATTACTCAGCATTATTGTGGTAATCTGATTAGAAAATTGATATTTAACAAGCGATTCTTTGGAGCTGGGATGCAAGATGGAGGACCAGGAGCTGAAGAAGAAGAGCATATCAACGCGATCTTCTCAATACTTAAGTACACATTTTCTTTTTGTGTTTCTGATTATGTTGGATTTTTACGTGGACGGTTTGATTTAGATGGTCAAGAAAAAAACATCAGAAAGGCAGTTGAAAGTGTGAGGAAGTATCATGATCCTTTAATAGACAAGAGAGCTCAACAATGGGCGAAAGGAACCAAGACAGTGAAAGAAGACTTGCTTGATGTCATGATCTCTCTCCAGAGTGAAGCGGGCATGACTTTATTGTCCGTTGATGAGATTAAAGCCCAAGTTATTGAAATGATGCTGGCATCGGTGGACAATCCATCGAATGCAGTTGAGTGGGCACTTGCAGAAATGATAAATCAAACTGAGACACTTCAAAGGGCGTAG

Network for GWHGAAZE033793

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	11	318	3.30E-31

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12153	CYP79A2	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		2-Oxocarboxylic acid metabolism	map01210
		Cyanoamino acid metabolism	map00460
		Glucosinolate biosynthesis	map00966

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	1.304
	SRR3591711	White flower	1.923
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	3.408
SRP173429	SRR8316895	Juvenile bud stage	0.068
	SRR8316896	Juvenile bud stage	0.003
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.027
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.048
	SRR8316898	Complete white stage	0.753
	SRR8316899	Complete white stage	0.336
	SRR8316903	Complete white stage	0.394
	SRR8316902	Silver flowering stage	302.154
	SRR8316904	Silver flowering stage	481.112
	SRR8316905	Silver flowering stage	303.483
	SRR8316906	Gold flowering stage	862.375
	SRR8316907	Gold flowering stage	829.029
	SRR8316908	Gold flowering stage	484.063
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.087
	CNS0095593	Slightly white alabastrum(diploid) 2	0.037
	CNS0095594	Slightly white alabastrum(diploid) 3	0.085
	CNS0095595	Whole white alabastrum(diploid) 2	0.026
	CNS0095596	Whole white alabastrum(diploid) 3	0.093
	CNS0095597	Whole white alabastrum(diploid) 4	0.058
	CNS0095598	Silvery flower (diploied) 1	11.889
	CNS0095599	Silvery flower (diploied) 2	9.386
	CNS0095600	Silvery flower (diploied) 3	204.486
	CNS0095601	Golden flower (diploid) 1	28.200
	CNS0095602	Golden flower (diploid) 2	124.614
	CNS0095603	Golden flower (diploid) 3	116.958
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.089
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.053
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.079
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	80.140
	CNS0095611	Silvery flower (tetraploid) 2	174.920
	CNS0095612	Silvery flower (tetraploid) 3	1437.581
	CNS0095613	Golden flower (tetraploid) 1	89.615
	CNS0095614	Golden flower (tetraploid) 2	58.812
	CNS0095615	Golden flower (tetraploid) 3	309.723
CRA001975	CRR073297	Stem 1	0.892
	CRR073298	Stem 2	0.734
	CRR073299	Stem 3	0.869
	CRR073300	Leaf 1	0.592
	CRR073301	Leaf 2	0.978
	CRR073302	Leaf 3	0.557
	CRR073303	Juvenile bud 1	0.838
	CRR073304	Juvenile bud 2	0.599
	CRR073305	Juvenile bud 3	0.846
	CRR073306	Third green 1	640.933
	CRR073307	Third green 2	312.169
	CRR073308	Third green 3	368.106
	CRR073309	Second white 1	1335.264
	CRR073310	Second white 2	1079.348
	CRR073311	Second white 3	1337.917
	CRR073312	Silver flowering 1	965.520
	CRR073313	Silver flowering 2	746.202
	CRR073314	Silver flowering 3	705.845
	CRR073315	Gold flowering 1	0.487
	CRR073316	Gold flowering 2	0.278
	CRR073317	Gold flowering 3	0.049
	CRR073318	Tawny withering 1	0.172
	CRR073319	Tawny withering 2	0.042
	CRR073320	Tawny withering 3	0.006