Gene detail

Detail information of GWHGAAZE033797

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AHF22089.1	0	CYP79D33 [Maesa lanceolata]
COG	YP_003950164.1	4E-24	cytochrome p450
Swissprot	tr\|Q9M7B8\|C79D1_MANES	0	Valine N-monooxygenase 1
trEMBL	tr\|W0FG45\|W0FG45_POPTR	0	Cytochrome P450 {ECO:0000313\|EMBL:AHF20912.1}
TAIR10	AT5G05260.1	5E-161	cytochrome p450 79a2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000138	gene	389253	391038	+
GWHAAZE00000138	mRNA	389253	391038	+
GWHAAZE00000138	exon	389253	390251	+
GWHAAZE00000138	exon	390343	391038	+
GWHAAZE00000138	CDS	389253	390251	+
GWHAAZE00000138	CDS	390343	391038	+

Transcript Sequence
>GWHTAAZE033837 CAGTTTAGCAACACGTGCAAAATTCCAAGTATATTTATATTGAGCATGGAAAGCCACTTCGTCACAACACCTAATTCCTCAACCTTTTCCACAGCTATGCTTCTATTAGCAGTTTGTATCTTCATGGTCATATATATACTAAGAAAAAGGTCACACCAACTCCCCCCTGGCCCAATGCAATGGCCTATTACCGGGAGCCTGCACGCATTGTTTACATGTAAGCCAGTGTTTCGATGGATTCACAGGCTTATGTGTGAGATGAATGCTGAAATCATTTGTATCCGCTTCCTGAACACCCATGTCATTGTTGTATCTAGTGATACTTTGGCAAAAGAGTTCTTGAAGACACAAGATATTGTGTTTTCTTCAAGACCTGTTTCTTTAGCTTCTGAAATAGCTAGTGGTGGATACCTGACAACTGCCTTTAGTCCCATGGGAGAGCAATGGAAAAAAATGAGGAGAATCCTCGCCACTGAAATCCTTTCCAAGAATAGACACAAGTGGCTTACGAGCAAGAGAAACGAGGAGGCCGACCACTTAGTCCGCTATGTCCACAACCAAGCGAGTAGCAACTTGATAGGGGGGATTGTCAACGTGAGGGTCATTGCTCGACATTATTGTGGTAATTTGATGAGAAATTTGATATTTAGCAAACGATTCTTTGGATCTGGGATGCAAGATGGAGGACCAGGAGCTGAAGAAGAAGAGCATGTCAGCGCGCTTTTCAAAATCCTCGATTACACATTTTCCTTTTGTGTTTCTGATTACGTTGGGTTTTTACGTGGGCGGTTTGATTTAGATGGTCACGAAAATATCATTAGAATGGCAGTTGAAAGTGTGAGGAAGTATCAAGATCCTTTAATAGACAAGAGAGTTCAACAATGGGCAAAAGGTACCAAGACAGTGAAAGAAGACTTGCTTGATGTCATGCTCTCTCTCCAGAATGAAGACTTGGGCACGAAATTATTGTCTGTTGATGAGATCAAAGCCCAAATTATTGAAATGATGCTGGCATCAGTGGACAATCCATCGAATGCAGTTGAATGGGCACTTGCAGAAATGATAAATCAAACTGCAATACTTAAAAGGGCGGTAGAAGAATTGGATAGAGTTGTAGGGACACACAGGTTGGTCCAAGAATCAGATTTGCCAAAATTGAACTACATTAAGTCATGTGCAAGGGAGGCCTTTAGACTCCATCCCATTGGGCCTTTTAACATCCCGCATGTATCCATGTCTGATACGACAATTGCTGGCTACTTCATACCAAAGGGTAGCCATGTGCTTTTGAGCCGACCAGGTCTTGGACGCAACCCAAAAATATGGGACGATCCATTAACCTTTAATCCAGAGCGACACTTGAGTGACAATGGCACTGATGAAGTGGCACTGACAGAGTCAGAGCTTCGACTTTTGTCTTTTAGTAGTGGGCGAAGAGGATGTGTAGGAGTTCTGCTAGGTTCGACAATGACAACAATGTTGTTAGCGAGGCTTCTTCAATGCTTCACCTGGAGTGCTTCACCTATTAAGCCACACATTGACCTCAGCGAGTCATATGAAAGTTTGGTTATGGCAAAACCTTTACATGCACTCGCTAGGCCGCGTTTGGGAGATAATTTGTATCCTAAATGTAAAATCCCTCCATGGACACCTAATAAGTCTGAAGAATGAAGAGTTATTATATGGAGTGTCTAA

Network for GWHGAAZE033797

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	55	526	1.80E-75

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12153	CYP79A2	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		2-Oxocarboxylic acid metabolism	map01210
		Cyanoamino acid metabolism	map00460
		Glucosinolate biosynthesis	map00966

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	1.145
	SRR3591707	mature leaf	1.075
	SRR3591708	Shoot apex	0.138
	SRR3591709	Stem	0.024
	SRR3591710	White floral bud	0.282
	SRR3591711	White flower	0.043
	SRR3591712	Green floral bud	0.021
	SRR3591713	Yellow flower	0.138
SRP173429	SRR8316895	Juvenile bud stage	0.177
	SRR8316896	Juvenile bud stage	0.027
	SRR8316897	Juvenile bud stage	0.017
	SRR8316894	Third green stage	0.112
	SRR8316900	Third green stage	0.052
	SRR8316901	Third green stage	0.044
	SRR8316898	Complete white stage	5.024
	SRR8316899	Complete white stage	0.313
	SRR8316903	Complete white stage	5.767
	SRR8316902	Silver flowering stage	6.044
	SRR8316904	Silver flowering stage	12.213
	SRR8316905	Silver flowering stage	6.238
	SRR8316906	Gold flowering stage	17.988
	SRR8316907	Gold flowering stage	17.858
	SRR8316908	Gold flowering stage	10.110
SRP132670	SRR6706286	Control	0.365
	SRR6706287	Light intensity 50%	0.893
	SRR6706288	Light intensity 20%	0.206
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.025
	CNS0095593	Slightly white alabastrum(diploid) 2	0.090
	CNS0095594	Slightly white alabastrum(diploid) 3	0.102
	CNS0095595	Whole white alabastrum(diploid) 2	0.055
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.511
	CNS0095599	Silvery flower (diploied) 2	1.016
	CNS0095600	Silvery flower (diploied) 3	4.813
	CNS0095601	Golden flower (diploid) 1	2.032
	CNS0095602	Golden flower (diploid) 2	3.638
	CNS0095603	Golden flower (diploid) 3	2.917
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.065
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.120
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.599
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.179
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.075
	CNS0095610	Silvery flower (tetraploid) 1	4.158
	CNS0095611	Silvery flower (tetraploid) 2	3.650
	CNS0095612	Silvery flower (tetraploid) 3	27.454
	CNS0095613	Golden flower (tetraploid) 1	12.701
	CNS0095614	Golden flower (tetraploid) 2	5.323
	CNS0095615	Golden flower (tetraploid) 3	8.697
CRA001975	CRR073297	Stem 1	0.542
	CRR073298	Stem 2	0.359
	CRR073299	Stem 3	0.272
	CRR073300	Leaf 1	0.213
	CRR073301	Leaf 2	0.194
	CRR073302	Leaf 3	0.359
	CRR073303	Juvenile bud 1	1.302
	CRR073304	Juvenile bud 2	19.215
	CRR073305	Juvenile bud 3	0.277
	CRR073306	Third green 1	51.993
	CRR073307	Third green 2	75.216
	CRR073308	Third green 3	51.106
	CRR073309	Second white 1	14.528
	CRR073310	Second white 2	17.411
	CRR073311	Second white 3	25.053
	CRR073312	Silver flowering 1	13.406
	CRR073313	Silver flowering 2	7.437
	CRR073314	Silver flowering 3	6.647
	CRR073315	Gold flowering 1	4.813
	CRR073316	Gold flowering 2	4.554
	CRR073317	Gold flowering 3	6.069
	CRR073318	Tawny withering 1	0.079
	CRR073319	Tawny withering 2	0.343
	CRR073320	Tawny withering 3	0.014