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Detail information of GWHGAAZE033804
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002265319.2
2.1307E-123
PREDICTED: heat stress transcription factor A-5 [Vitis vinifera]
Swissprot
tr|Q94BZ5|HSFA5_ARATH
1E-89
Heat stress transcription factor A-5
trEMBL
tr|F6GWF0|F6GWF0_VITVI
2E-126
Putative uncharacterized protein {ECO:0000313|EMBL:CCB44313.1}
TAIR10
AT4G13980.1
9E-73
winged-helix DNA-binding transcription factor family protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000139
gene
201704
204352
-
GWHAAZE00000139
mRNA
201704
204352
-
GWHAAZE00000139
exon
204239
204352
-
GWHAAZE00000139
exon
203011
203142
-
GWHAAZE00000139
exon
201704
202636
-
GWHAAZE00000139
CDS
204239
204352
-
GWHAAZE00000139
CDS
203011
203142
-
GWHAAZE00000139
CDS
201704
202636
-
Transcript Sequence
>GWHTAAZE033844 ATGGTGCCTAATTCTCTAGCCATTTGTTGTGGATTGATTAGGTCTGCTACCAAGGATTCCTTGGGTGAGAAAGTAACGGGATATGGTAATGGAAATTCAGGCCATAAAGTTAATGGTTTCCGGAAGATTGACCCTGAGAAATGGGAATTTGCCAATGAAGATTTCGTGAAAGATCGGAAACATCTTCTCAGGAATATCCACCGTAGAAAACCAATCCACAGCCACAGTAATCCTCAAGGTTCAACGCAACCTGCTGCAAAGCTTCAGCTCGAGCAACTGACCCGACGGGTACTCGGTATGGAGCAAAGGCAAGACAACTTACTAACCACCCTAGAAAAGGCGATTCAAAATCCAGATTTTATCGAACACCTTGCGCGAAAACTCGAATCTATGGATTTCTCCTCTTATAATAAGAAAAGGCGATTACCTCAATCTGATAACGCTCTATCAGTACCAGGTGATAGTTTTGTTGATAATAGTAGTAGCTCTAGACCCGAGTTTGGTAATATTTATCAGCAAGATTTATCCAATAAGCTCACATTAGAGTTATCGCATAGTACTCAGAGCTCGAATGAAGATGGGGGAAGCCCGATGAGGAGAGACCCACAAACAGGTCCCGCCAGTCTTTTATTTGCCCCCGAGACACTCGAGCTTTCGGATACCGGAGCGTCTTTTAATTTTAACAAAATGGGTGGTTCTTCTTTTTCGAGCCCGGGTCCGGGATTGCTTTCCTTGCAGCAAAGTTCCACTTCAAATGAAGATATTGAAGGTCATATCTCTTGCCATTTGAATCTTACTCTTGCTTCTGCTCCATTGAAAGTCAACAAAAGTCAACCCTCCGCCTCGTTGATTGGTAAAAACTCACTAGAGTCGAGGTCTAGTGCGAATGTGAATATGGCTGACGTCACATTTCCCGAGAAGAACCGGACCCTTTTGAGCCATGGCTCAGGCAGTGCACCGGGTAATGATAATCAAGTGGCTGAAACTGCTCCTCCTCTAGGTCGGGTTAATGATGTGTTTTGGGAACAGTTCTTAACTGAAAGACCAGGGGCTTCTGAAACTGAAGAGGCCAGCTCGAATTTTAGGGCAAATCCGTATGAGGAGCAAGACGATAGACGAGCAGGACATGGATTTTCCCGAAACTACGCGAAGAACAACATGGATCAGCTTTCTCTTTGA
Network for GWHGAAZE033804
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
--
--
--
--
--
Protein Sequence
>GWHPAAZE033826 MVPNSLAICCGLIRSATKDSLGEKVTGYGNGNSGHKVNGFRKIDPEKWEFANEDFVKDRKHLLRNIHRRKPIHSHSNPQGSTQPAAKLQLEQLTRRVLGMEQRQDNLLTTLEKAIQNPDFIEHLARKLESMDFSSYNKKRRLPQSDNALSVPGDSFVDNSSSSRPEFGNIYQQDLSNKLTLELSHSTQSSNEDGGSPMRRDPQTGPASLLFAPETLELSDTGASFNFNKMGGSSFSSPGPGLLSLQQSSTSNEDIEGHISCHLNLTLASAPLKVNKSQPSASLIGKNSLESRSSANVNMADVTFPEKNRTLLSHGSGSAPGNDNQVAETAPPLGRVNDVFWEQFLTERPGASETEEASSNFRANPYEEQDDRRAGHGFSRNYAKNNMDQLSL
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
11.287
SRR3591706
second leaf
10.331
SRR3591707
mature leaf
15.550
SRR3591708
Shoot apex
11.753
SRR3591709
Stem
13.412
SRR3591710
White floral bud
13.036
SRR3591711
White flower
17.294
SRR3591712
Green floral bud
10.977
SRR3591713
Yellow flower
14.987
SRP173429
SRR8316895
Juvenile bud stage
6.470
SRR8316896
Juvenile bud stage
8.089
SRR8316897
Juvenile bud stage
3.473
SRR8316894
Third green stage
3.467
SRR8316900
Third green stage
6.089
SRR8316901
Third green stage
7.866
SRR8316898
Complete white stage
4.273
SRR8316899
Complete white stage
13.694
SRR8316903
Complete white stage
7.797
SRR8316902
Silver flowering stage
4.989
SRR8316904
Silver flowering stage
6.729
SRR8316905
Silver flowering stage
2.841
SRR8316906
Gold flowering stage
15.385
SRR8316907
Gold flowering stage
12.411
SRR8316908
Gold flowering stage
13.011
SRP132670
SRR6706286
Control
9.464
SRR6706287
Light intensity 50%
8.555
SRR6706288
Light intensity 20%
9.719
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
7.923
CNS0095593
Slightly white alabastrum(diploid) 2
6.575
CNS0095594
Slightly white alabastrum(diploid) 3
5.701
CNS0095595
Whole white alabastrum(diploid) 2
6.678
CNS0095596
Whole white alabastrum(diploid) 3
6.005
CNS0095597
Whole white alabastrum(diploid) 4
4.469
CNS0095598
Silvery flower (diploied) 1
14.082
CNS0095599
Silvery flower (diploied) 2
9.346
CNS0095600
Silvery flower (diploied) 3
14.102
CNS0095601
Golden flower (diploid) 1
10.870
CNS0095602
Golden flower (diploid) 2
16.917
CNS0095603
Golden flower (diploid) 3
14.853
CNS0095604
Slightly white alabastrum(tetraploid) 1
5.907
CNS0095605
Slightly white alabastrum(tetraploid) 2
6.010
CNS0095606
Slightly white alabastrum(tetraploid) 3
9.786
CNS0095607
Whole white alabastrum(tetraploid) 1
4.994
CNS0095608
Whole white alabastrum(tetraploid) 2
5.284
CNS0095609
Whole white alabastrum(tetraploid) 3
7.463
CNS0095610
Silvery flower (tetraploid) 1
12.483
CNS0095611
Silvery flower (tetraploid) 2
14.250
CNS0095612
Silvery flower (tetraploid) 3
13.774
CNS0095613
Golden flower (tetraploid) 1
8.991
CNS0095614
Golden flower (tetraploid) 2
14.089
CNS0095615
Golden flower (tetraploid) 3
14.705
CRA001975
CRR073297
Stem 1
10.259
CRR073298
Stem 2
11.113
CRR073299
Stem 3
12.570
CRR073300
Leaf 1
10.702
CRR073301
Leaf 2
11.239
CRR073302
Leaf 3
8.978
CRR073303
Juvenile bud 1
10.448
CRR073304
Juvenile bud 2
8.771
CRR073305
Juvenile bud 3
10.256
CRR073306
Third green 1
7.560
CRR073307
Third green 2
4.999
CRR073308
Third green 3
8.790
CRR073309
Second white 1
10.302
CRR073310
Second white 2
10.139
CRR073311
Second white 3
9.100
CRR073312
Silver flowering 1
8.623
CRR073313
Silver flowering 2
6.706
CRR073314
Silver flowering 3
6.272
CRR073315
Gold flowering 1
12.027
CRR073316
Gold flowering 2
19.385
CRR073317
Gold flowering 3
17.851
CRR073318
Tawny withering 1
18.743
CRR073319
Tawny withering 2
15.366
CRR073320
Tawny withering 3
13.497