Gene detail

Detail information of GWHGAAZE033815

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010097743.1	5.9154E-133	Protein WAX2 [Morus notabilis]
Swissprot	tr\|F4HVY0\|CER1_ARATH	5E-105	Protein ECERIFERUM 1
trEMBL	tr\|W9R5F2\|W9R5F2_9ROSA	2E-133	Protein WAX2 {ECO:0000313\|EMBL:EXB70698.1}
TAIR10	AT1G02205.1	1E-80	Fatty acid hydroxylase superfamily

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000141	gene	51497	71388	+
GWHAAZE00000141	mRNA	51497	71388	+
GWHAAZE00000141	exon	51497	51870	+
GWHAAZE00000141	exon	52047	52154	+
GWHAAZE00000141	exon	52251	52454	+
GWHAAZE00000141	exon	57453	57626	+
GWHAAZE00000141	exon	68455	68535	+
GWHAAZE00000141	exon	68625	68849	+
GWHAAZE00000141	exon	70074	70166	+
GWHAAZE00000141	exon	70829	71014	+
GWHAAZE00000141	exon	71332	71388	+
GWHAAZE00000141	five_prime_UTR	51497	51543	+
GWHAAZE00000141	CDS	51544	51870	+
GWHAAZE00000141	CDS	52047	52154	+
GWHAAZE00000141	CDS	52251	52454	+
GWHAAZE00000141	CDS	57453	57626	+
GWHAAZE00000141	CDS	68455	68535	+
GWHAAZE00000141	CDS	68625	68849	+
GWHAAZE00000141	CDS	70074	70166	+
GWHAAZE00000141	CDS	70829	71014	+
GWHAAZE00000141	CDS	71332	71388	+

Transcript Sequence
>GWHTAAZE033855 ACCACTCCCTTCATCACACTCAATTTCGGACTAATTACTCACTCTTCATGCCAATTTACGACTACATCTATGGTACCATGGACAAGTCCGCTGATACATTGCATGAAGATTCACTCAAAAGACAAGAAGAGCTACCAGATGTCGTTCATTTGACGCATATGACCACGCCAGATTCCATATATCAACTCCGGATAGGGTTTGCTTCTTTCGCCTCGAAACCCCACACATCCAAATGGTATATATGGCTAATGTGGCCTGTGACACGTTGGTCCATGATCATGACATGCCTTTGTGGTCGTACGTTCACCACGGAGAGGAATGCATTTAAAAAACTCAATTTACAATCTTGGGCAATACCACGATACAGTGGACAATACTTGCATGAATGGGAAAGAGATAAAATAAATAAGTTGATTGAAGAGGCTATACTTGAAGCAGAGGTTAGTGGCACTAAGGTGTTAAGTCTAGGTCTCTTGAACCAGGGGGAAGAATTGAATGGTAATAGGGAACTTTACATAAAAAGGTACCCTAAATTGAAAGTGAACGTGGTGGATGGAAGTAGTTTGGTAGTTGCAATTATTATTAACAAGATTCCAAAAGGGACAACACAAGTTCTACTTGTAGCCAAACAACAATCTATGGTTGCCTCTTCTATTGTCTCTGCATTATGCCAATGTGGTATTCAGATATGGGTAGTTGGAGATGGATTGAGTGACGAAGAACAAATGAAGGCACCAAAAGGAACAACGTTCATTCCATTTTCACAATTCCCCCCAAAGAAAGTACGCAAAGATTGCTTGTGCCACTACACACCTTCAATGTTGGCTCCCAGTTCTCTTGAAAATCTGCACTCTTGTGAGTACTTGCATGAATGGGAAAGAGGTAAAATAAATCAGTTGATTGAAGAGGCTATACTTGAAGCAGAGGCTAGAGGCACTAAGAAATATTTATTTTATTTTCAGGGGGAAGAATTGAATGGTAATGGGGAACTTTACATAAAAAGGTACCCTGAATTGAAAGTGAAGGTGGTGGATGGAAGTAGTTTAGCAGTTGCAATTGTTATTAACAAGATTCCAAATGGAACAACACAAGTTCTACTTGTAGCCAAACAACAATCTAAGGTTGCCTCTTCTATTGCCTCTGCATTATGCCAATGTGGTATTCAGGTAGTTACATTATTCAAAGAAGAATATGAGAAGCCCAAGCTAACCACCAAGTCTGAAAATAATTTGCCACTCTCAAAAAGTTATACTCAGAAGATATGGGTAGTTGGAGATGGATTGAGCGAAGAAGAACAAATGAAGGCACGAAAAGGAACAATATTCATTCCATTCTCACAATTCCCTCCGAAGAAAGTACGCAAAGATTGCTTGTACCACTACACACCTTCAATGTTGGCTCCCAGTTCTCTTGAAAATCTGCACTCTGAGAGGTTAGTGATTTTAAGTGACGAGTGCATGGAGGGTAGCTGGAATAATGCATGGCTTAGAAGGATGGAATGA

Network for GWHGAAZE033815

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12076.9	Wax2_C	197	273	9.50E-26
PF12076.9	Wax2_C	352	460	3.10E-36

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15404	K15404, CER1	Biosynthesis of secondary metabolites	map01110
K15404	K15404, CER1	Cutin, suberine and wax biosynthesis	map00073

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.046
	SRR3591707	mature leaf	0.194
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.029
	SRR3591710	White floral bud	0.174
	SRR3591711	White flower	0.098
	SRR3591712	Green floral bud	0.219
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.015
	SRR8316896	Juvenile bud stage	0.160
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.043
	SRR8316901	Third green stage	0.153
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.139
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.024
	SRR8316904	Silver flowering stage	0.031
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.047
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.016
	CNS0095598	Silvery flower (diploied) 1	0.013
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.082
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.016
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.012
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.002
	CNS0095613	Golden flower (tetraploid) 1	0.090
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.004
	CRR073298	Stem 2	0.006
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.265
	CRR073316	Gold flowering 2	0.205
	CRR073317	Gold flowering 3	0.061
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000