Detail information of GWHGAAZE033858


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU46210.14.81254E-73hypothetical protein MIMGU_mgv1a008386mg [Erythranthe guttata]
Swissprottr|O49508|FB237_ARATH3E-53F-box protein At4g18380
trEMBLtr|A0A022S4E0|A0A022S4E0_ERYGU2E-73Uncharacterized protein {ECO:0000313|EMBL:EYU46210.1}
TAIR10AT4G18380.24E-42F-box family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000142gene5309854225-
GWHAAZE00000142mRNA5309854225-
GWHAAZE00000142exon5309854225-
GWHAAZE00000142CDS5309854225-
Transcript Sequence

Network for GWHGAAZE033858

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.069
SRR3591706second leaf1.680
SRR3591707mature leaf1.292
SRR3591708Shoot apex6.888
SRR3591709Stem12.884
SRR3591710White floral bud10.738
SRR3591711White flower19.505
SRR3591712Green floral bud2.604
SRR3591713Yellow flower121.318
SRP173429 SRR8316895Juvenile bud stage 17.806
SRR8316896Juvenile bud stage 10.077
SRR8316897Juvenile bud stage 17.411
SRR8316894Third green stage 1.844
SRR8316900Third green stage 0.611
SRR8316901Third green stage 3.353
SRR8316898Complete white stage 0.610
SRR8316899Complete white stage 4.181
SRR8316903Complete white stage 0.684
SRR8316902Silver flowering stage0.621
SRR8316904Silver flowering stage1.218
SRR8316905Silver flowering stage0.955
SRR8316906Gold flowering stage 16.604
SRR8316907Gold flowering stage 6.659
SRR8316908Gold flowering stage 28.229
SRP132670SRR6706286Control1.937
SRR6706287Light intensity 50%2.045
SRR6706288Light intensity 20%0.779
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.603
CNS0095593Slightly white alabastrum(diploid) 27.124
CNS0095594Slightly white alabastrum(diploid) 38.114
CNS0095595Whole white alabastrum(diploid) 24.412
CNS0095596Whole white alabastrum(diploid) 30.507
CNS0095597Whole white alabastrum(diploid) 41.803
CNS0095598Silvery flower (diploied) 110.663
CNS0095599Silvery flower (diploied) 215.302
CNS0095600Silvery flower (diploied) 36.741
CNS0095601Golden flower (diploid) 119.377
CNS0095602Golden flower (diploid) 218.127
CNS0095603Golden flower (diploid) 319.729
CNS0095604Slightly white alabastrum(tetraploid) 10.091
CNS0095605Slightly white alabastrum(tetraploid) 20.045
CNS0095606Slightly white alabastrum(tetraploid) 30.308
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.130
CNS0095610Silvery flower (tetraploid) 12.379
CNS0095611Silvery flower (tetraploid) 20.655
CNS0095612Silvery flower (tetraploid) 33.949
CNS0095613Golden flower (tetraploid) 125.407
CNS0095614Golden flower (tetraploid) 27.263
CNS0095615Golden flower (tetraploid) 371.683
CRA001975CRR073297Stem 15.216
CRR073298Stem 24.413
CRR073299Stem 34.064
CRR073300Leaf 15.624
CRR073301Leaf 29.014
CRR073302Leaf 32.331
CRR073303Juvenile bud 10.881
CRR073304Juvenile bud 23.892
CRR073305Juvenile bud 31.818
CRR073306Third green 11.950
CRR073307Third green 22.167
CRR073308Third green 33.597
CRR073309Second white 13.284
CRR073310Second white 26.235
CRR073311Second white 36.670
CRR073312Silver flowering 141.722
CRR073313Silver flowering 220.107
CRR073314Silver flowering 323.583
CRR073315Gold flowering 11.100
CRR073316Gold flowering 24.871
CRR073317Gold flowering 34.740
CRR073318Tawny withering 19.906
CRR073319Tawny withering 219.909
CRR073320Tawny withering 37.939