Detail information of GWHGAAZE033874


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrBAG16519.13.73817E-26putative aspartic protease [Capsicum chinense]
Swissprottr|P42210|ASPR_HORVU3E-22Phytepsin 11 kDa subunit (Precursor)
trEMBLtr|B1Q478|B1Q478_CAPCH1E-26Putative aspartic protease {ECO:0000313|EMBL:BAG16519.1}
TAIR10AT1G11910.11E-16aspartic proteinase A1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000145gene6968870627-
GWHAAZE00000145mRNA6968870627-
GWHAAZE00000145exon6968869835-
GWHAAZE00000145exon6991370026-
GWHAAZE00000145exon7040570495-
GWHAAZE00000145exon7060670627-
GWHAAZE00000145CDS7060670627-
GWHAAZE00000145CDS7040570495-
GWHAAZE00000145CDS6991370026-
GWHAAZE00000145CDS6968869835-
Transcript Sequence

Network for GWHGAAZE033874

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00026.24Asp731252.40E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.045
SRR3591711White flower0.000
SRR3591712Green floral bud0.090
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 9.865
SRR8316896Juvenile bud stage 15.309
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 6.923
SRR8316900Third green stage 13.598
SRR8316901Third green stage 12.172
SRR8316898Complete white stage 9.150
SRR8316899Complete white stage 24.518
SRR8316903Complete white stage 16.320
SRR8316902Silver flowering stage11.360
SRR8316904Silver flowering stage20.311
SRR8316905Silver flowering stage7.228
SRR8316906Gold flowering stage 17.176
SRR8316907Gold flowering stage 17.361
SRR8316908Gold flowering stage 5.033
SRP132670SRR6706286Control5.753
SRR6706287Light intensity 50%9.177
SRR6706288Light intensity 20%10.272
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.127
CNS0095593Slightly white alabastrum(diploid) 215.669
CNS0095594Slightly white alabastrum(diploid) 311.777
CNS0095595Whole white alabastrum(diploid) 213.121
CNS0095596Whole white alabastrum(diploid) 313.203
CNS0095597Whole white alabastrum(diploid) 417.526
CNS0095598Silvery flower (diploied) 119.900
CNS0095599Silvery flower (diploied) 210.169
CNS0095600Silvery flower (diploied) 32.956
CNS0095601Golden flower (diploid) 16.659
CNS0095602Golden flower (diploid) 24.008
CNS0095603Golden flower (diploid) 33.235
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.111
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.113
CNS0095611Silvery flower (tetraploid) 20.002
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.073
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 15.262
CRR073298Stem 25.969
CRR073299Stem 30.068
CRR073300Leaf 18.998
CRR073301Leaf 29.916
CRR073302Leaf 30.340
CRR073303Juvenile bud 11.227
CRR073304Juvenile bud 20.029
CRR073305Juvenile bud 31.282
CRR073306Third green 10.517
CRR073307Third green 20.145
CRR073308Third green 30.088
CRR073309Second white 10.246
CRR073310Second white 21.086
CRR073311Second white 30.000
CRR073312Silver flowering 10.081
CRR073313Silver flowering 21.823
CRR073314Silver flowering 30.328
CRR073315Gold flowering 10.117
CRR073316Gold flowering 20.475
CRR073317Gold flowering 30.455
CRR073318Tawny withering 14.713
CRR073319Tawny withering 24.320
CRR073320Tawny withering 30.796