Detail information of GWHGAAZE033876


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006428328.19.99008E-53hypothetical protein CICLE_v10011525mg [Citrus clementina]
Swissprottr|O65390|APA1_ARATH3E-41Aspartic proteinase A1 (Precursor)
trEMBLtr|V4S2H2|V4S2H2_9ROSI4E-53Uncharacterized protein {ECO:0000313|EMBL:ESR41568.1}
TAIR10AT1G11910.17E-36aspartic proteinase A1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000145gene8585587022-
GWHAAZE00000145mRNA8585587022-
GWHAAZE00000145exon8585585983-
GWHAAZE00000145exon8616686254-
GWHAAZE00000145exon8673487022-
GWHAAZE00000145CDS8673487022-
GWHAAZE00000145CDS8616686254-
GWHAAZE00000145CDS8585585983-
Transcript Sequence

Network for GWHGAAZE033876

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00026.24Asp981661.40E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.003
SRR3591713Yellow flower0.048
SRP173429 SRR8316895Juvenile bud stage 15.124
SRR8316896Juvenile bud stage 22.716
SRR8316897Juvenile bud stage 1.646
SRR8316894Third green stage 9.924
SRR8316900Third green stage 18.308
SRR8316901Third green stage 19.683
SRR8316898Complete white stage 15.786
SRR8316899Complete white stage 29.048
SRR8316903Complete white stage 27.302
SRR8316902Silver flowering stage9.432
SRR8316904Silver flowering stage20.115
SRR8316905Silver flowering stage9.436
SRR8316906Gold flowering stage 23.653
SRR8316907Gold flowering stage 23.959
SRR8316908Gold flowering stage 8.187
SRP132670SRR6706286Control21.238
SRR6706287Light intensity 50%23.580
SRR6706288Light intensity 20%23.692
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.430
CNS0095593Slightly white alabastrum(diploid) 210.487
CNS0095594Slightly white alabastrum(diploid) 37.441
CNS0095595Whole white alabastrum(diploid) 26.845
CNS0095596Whole white alabastrum(diploid) 38.922
CNS0095597Whole white alabastrum(diploid) 46.066
CNS0095598Silvery flower (diploied) 111.964
CNS0095599Silvery flower (diploied) 29.774
CNS0095600Silvery flower (diploied) 36.041
CNS0095601Golden flower (diploid) 19.037
CNS0095602Golden flower (diploid) 24.857
CNS0095603Golden flower (diploid) 34.601
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.012
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.100
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 116.473
CRR073298Stem 216.539
CRR073299Stem 30.525
CRR073300Leaf 121.129
CRR073301Leaf 223.623
CRR073302Leaf 31.024
CRR073303Juvenile bud 12.709
CRR073304Juvenile bud 20.377
CRR073305Juvenile bud 31.606
CRR073306Third green 10.691
CRR073307Third green 20.000
CRR073308Third green 30.150
CRR073309Second white 10.046
CRR073310Second white 20.754
CRR073311Second white 30.512
CRR073312Silver flowering 10.283
CRR073313Silver flowering 20.175
CRR073314Silver flowering 30.132
CRR073315Gold flowering 10.989
CRR073316Gold flowering 23.094
CRR073317Gold flowering 30.104
CRR073318Tawny withering 11.996
CRR073319Tawny withering 23.669
CRR073320Tawny withering 34.219