Detail information of GWHGAAZE033905


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI39660.38.8966E-147unnamed protein product [Vitis vinifera]
Swissprottr|O65399|E131_ARATH3E-27Glucan endo-1,3-beta-glucosidase 1 (Precursor)
trEMBLtr|D7UA96|D7UA96_VITVI3E-147Putative uncharacterized protein {ECO:0000313|EMBL:CBI39660.3}
TAIR10AT2G30933.21E-28Carbohydrate-binding X8 domain superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000145gene604886608065-
GWHAAZE00000145mRNA604886608065-
GWHAAZE00000145exon604886605118-
GWHAAZE00000145exon605480606856-
GWHAAZE00000145exon607990608065-
GWHAAZE00000145CDS607990608065-
GWHAAZE00000145CDS605480606856-
GWHAAZE00000145CDS604886605118-
Transcript Sequence

Network for GWHGAAZE033905

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0162


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07983.14X84084781.50E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf70.987
SRR3591706second leaf14.047
SRR3591707mature leaf3.658
SRR3591708Shoot apex26.023
SRR3591709Stem22.271
SRR3591710White floral bud110.416
SRR3591711White flower6.289
SRR3591712Green floral bud95.811
SRR3591713Yellow flower0.689
SRP173429 SRR8316895Juvenile bud stage 9.489
SRR8316896Juvenile bud stage 13.892
SRR8316897Juvenile bud stage 8.057
SRR8316894Third green stage 12.023
SRR8316900Third green stage 46.323
SRR8316901Third green stage 44.580
SRR8316898Complete white stage 16.069
SRR8316899Complete white stage 68.847
SRR8316903Complete white stage 80.976
SRR8316902Silver flowering stage2.020
SRR8316904Silver flowering stage5.070
SRR8316905Silver flowering stage0.434
SRR8316906Gold flowering stage 0.436
SRR8316907Gold flowering stage 0.268
SRR8316908Gold flowering stage 2.278
SRP132670SRR6706286Control37.187
SRR6706287Light intensity 50%30.786
SRR6706288Light intensity 20%26.441
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.921
CNS0095593Slightly white alabastrum(diploid) 236.305
CNS0095594Slightly white alabastrum(diploid) 317.791
CNS0095595Whole white alabastrum(diploid) 226.040
CNS0095596Whole white alabastrum(diploid) 326.743
CNS0095597Whole white alabastrum(diploid) 429.073
CNS0095598Silvery flower (diploied) 15.892
CNS0095599Silvery flower (diploied) 24.444
CNS0095600Silvery flower (diploied) 34.012
CNS0095601Golden flower (diploid) 15.868
CNS0095602Golden flower (diploid) 23.660
CNS0095603Golden flower (diploid) 32.714
CNS0095604Slightly white alabastrum(tetraploid) 143.616
CNS0095605Slightly white alabastrum(tetraploid) 232.810
CNS0095606Slightly white alabastrum(tetraploid) 375.506
CNS0095607Whole white alabastrum(tetraploid) 125.728
CNS0095608Whole white alabastrum(tetraploid) 225.971
CNS0095609Whole white alabastrum(tetraploid) 337.109
CNS0095610Silvery flower (tetraploid) 15.525
CNS0095611Silvery flower (tetraploid) 210.055
CNS0095612Silvery flower (tetraploid) 36.846
CNS0095613Golden flower (tetraploid) 10.593
CNS0095614Golden flower (tetraploid) 23.475
CNS0095615Golden flower (tetraploid) 31.388
CRA001975CRR073297Stem 133.726
CRR073298Stem 240.012
CRR073299Stem 344.816
CRR073300Leaf 171.667
CRR073301Leaf 262.197
CRR073302Leaf 349.453
CRR073303Juvenile bud 148.680
CRR073304Juvenile bud 244.765
CRR073305Juvenile bud 393.491
CRR073306Third green 11.240
CRR073307Third green 24.404
CRR073308Third green 34.911
CRR073309Second white 10.071
CRR073310Second white 20.699
CRR073311Second white 30.139
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.050
CRR073314Silver flowering 30.237
CRR073315Gold flowering 16.167
CRR073316Gold flowering 28.346
CRR073317Gold flowering 35.908
CRR073318Tawny withering 131.299
CRR073319Tawny withering 221.377
CRR073320Tawny withering 345.025