Gene detail information of Glyur000001s00000020.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65700.20Leucine-rich receptor-like protein kinase family protein
NRCBI35733.30unnamed protein product [Vitis vinifera]
COGYP_004775215.15.00E-52RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|O49545|BAME1_ARATH0Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 (Precursor)
trEMBLtr|C6ZRW9|C6ZRW9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G16780.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00001124066127975+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000020.1PF08263.7LRRNT_223608.00E-11
Glyur000001s00000020.1PF13855.1LRR_81101682.60E-07
Glyur000001s00000020.1PF13855.1LRR_85205792.90E-08
Glyur000001s00000020.1PF00069.20Pkinase7108712.90E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control156.196
SRR1783600control154.351
SRR1783602moderate drought stress126.531
SRR1811619moderate drought stress123.722

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain70.745
DRR006520Root Summer glycyrrhizin high producing strain70.283
DRR006521Root Winter glycyrrhizin high producing strain10.401
DRR006522Root Winter glycyrrhizin high producing strain9.946
DRR006523Root Summer glycyrrhizin low producing strain26.538
DRR006524Root Summer glycyrrhizin low producing strain26.204
DRR006525Leaf Summer glycyrrhizin high producing strain12.185
DRR006526Leaf Summer glycyrrhizin high producing strain12.029

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)76.891
SRR2868004Drought Stress(Tissue:root)58.256
SRR2967015Control (Tissue:root)75.825

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.628
SRR9715740Leave7.625
SRR9715741Leave6.906
SRR9715739Root100.029
SRR9715742Root136.860
SRR9715743Root126.808

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.643
SRR8749028MeJA induced 9h3.675
SRR8749029MeJA induced 9h3.148
SRR8749030Uninduced0.030
SRR8749031Uninduced0.024
SRR8749032Uninduced0.193

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root124.663
SRR8400027Control-Root132.892

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved