Gene detail information of Glyur000001s00000028.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37790.16.00E-72Homeobox-leucine zipper protein family
NRXP_004509044.14.03E-129PREDICTED: homeobox-leucine zipper protein HAT22-like [Cicer arietinum]
Swissprottr|P46604|HAT22_ARATH4.00E-89Homeobox-leucine zipper protein HAT22
trEMBLtr|V7CEJ4|V7CEJ4_PHAVU4.00E-128Uncharacterized protein {ECO:0000313|EMBL:ESW27783.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00001178502180385-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB
EAR motif-containing ProteinsHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000028.1PF00046.24Homeobox1632174.90E-16
Glyur000001s00000028.1PF02183.13HALZ2192629.40E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.136
SRR1783600control26.923
SRR1783602moderate drought stress23.859
SRR1811619moderate drought stress23.719

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.748
DRR006520Root Summer glycyrrhizin high producing strain41.335
DRR006521Root Winter glycyrrhizin high producing strain1.503
DRR006522Root Winter glycyrrhizin high producing strain1.158
DRR006523Root Summer glycyrrhizin low producing strain81.775
DRR006524Root Summer glycyrrhizin low producing strain81.085
DRR006525Leaf Summer glycyrrhizin high producing strain40.685
DRR006526Leaf Summer glycyrrhizin high producing strain39.149

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.003
SRR2868004Drought Stress(Tissue:root)70.663
SRR2967015Control (Tissue:root)75.401

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.855
SRR9715740Leave28.448
SRR9715741Leave24.021
SRR9715739Root14.816
SRR9715742Root20.923
SRR9715743Root15.628

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.009
SRR8749028MeJA induced 9h15.435
SRR8749029MeJA induced 9h12.704
SRR8749030Uninduced11.616
SRR8749031Uninduced10.113
SRR8749032Uninduced6.382

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.470
SRR8400027Control-Root41.932

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved