Gene detail information of Glyur000001s00000067.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09090.20respiratory burst oxidase homolog B
NRXP_003591142.10Respiratory burst oxidase-like protein [Medicago truncatula]
COGYP_007146260.15.00E-84putative ferric reductase [Cylindrospermum stagnale PCC 7417]
Swissprottr|Q948T9|RBOHB_SOLTU0Respiratory burst oxidase homolog protein B
trEMBLtr|G7I8P3|G7I8P3_MEDTR0Respiratory burst oxidase-like protein {ECO:0000313|EMBL:AES61393.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00001359219368420-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13447RBOH EC:1.6.3.- 1.11.1.- MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


cellular_component

GO:0016020  membrane


molecular_function

GO:0004601  peroxidase activity

GO:0005509  calcium ion binding

GO:0016174  NAD(P)H oxidase activity

GO:0016491  oxidoreductase activity

GO:0050664  oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000067.1PF08414.5NADPH_Ox1172152.70E-43
Glyur000001s00000067.1PF01794.14Ferric_reduct3785323.70E-18
Glyur000001s00000067.1PF08022.7FAD_binding_85766949.90E-29
Glyur000001s00000067.1PF08030.7NAD_binding_67018738.70E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control61.150
SRR1783600control61.422
SRR1783602moderate drought stress40.502
SRR1811619moderate drought stress40.216

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain44.391
DRR006520Root Summer glycyrrhizin high producing strain44.025
DRR006521Root Winter glycyrrhizin high producing strain100.279
DRR006522Root Winter glycyrrhizin high producing strain97.703
DRR006523Root Summer glycyrrhizin low producing strain74.361
DRR006524Root Summer glycyrrhizin low producing strain74.471
DRR006525Leaf Summer glycyrrhizin high producing strain0.728
DRR006526Leaf Summer glycyrrhizin high producing strain0.780

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.385
SRR2868004Drought Stress(Tissue:root)9.089
SRR2967015Control (Tissue:root)10.450

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.522
SRR9715740Leave6.493
SRR9715741Leave8.941
SRR9715739Root26.943
SRR9715742Root78.104
SRR9715743Root66.649

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h137.758
SRR8749028MeJA induced 9h386.798
SRR8749029MeJA induced 9h163.246
SRR8749030Uninduced237.533
SRR8749031Uninduced254.063
SRR8749032Uninduced118.320

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.156
SRR8400027Control-Root27.082

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved