Gene detail information of Glyur000001s00000094.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G21430.20DNA binding
NRXP_004495723.10PREDICTED: protein ALWAYS EARLY 2-like isoform X2 [Cicer arietinum]
Swissprottr|Q6A332|ALY3_ARATH0Protein ALWAYS EARLY 3
trEMBLtr|G7I851|G7I851_MEDTR0Always EARLY-like protein {ECO:0000313|EMBL:AES61372.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00001512026520948-


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0007049  cell cycle


cellular_component

GO:0017053  transcriptional repressor complex


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000094.1PF00249.26Myb_DNA-binding51877.80E-08
Glyur000001s00000094.1PF06584.8DIRP6147151.90E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.900
SRR1783600control8.017
SRR1783602moderate drought stress11.338
SRR1811619moderate drought stress11.225

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.731
DRR006520Root Summer glycyrrhizin high producing strain6.486
DRR006521Root Winter glycyrrhizin high producing strain3.650
DRR006522Root Winter glycyrrhizin high producing strain3.610
DRR006523Root Summer glycyrrhizin low producing strain8.574
DRR006524Root Summer glycyrrhizin low producing strain8.505
DRR006525Leaf Summer glycyrrhizin high producing strain3.015
DRR006526Leaf Summer glycyrrhizin high producing strain2.919

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.317
SRR2868004Drought Stress(Tissue:root)5.407
SRR2967015Control (Tissue:root)6.307

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.207
SRR9715740Leave2.958
SRR9715741Leave4.051
SRR9715739Root1.294
SRR9715742Root8.363
SRR9715743Root7.530

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.389
SRR8749028MeJA induced 9h5.493
SRR8749029MeJA induced 9h4.560
SRR8749030Uninduced1.351
SRR8749031Uninduced1.491
SRR8749032Uninduced1.746

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.147
SRR8400027Control-Root10.271

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved