Gene detail information of Glyur000001s00000096.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G55020.10lipoxygenase 1
NRXP_003536076.10PREDICTED: probable linoleate 9S-lipoxygenase 5-like [Glycine max]
Swissprottr|Q43191|LOX15_SOLTU0Probable linoleate 9S-lipoxygenase 5
trEMBLtr|I1LBB9|I1LBB9_SOYBN0Lipoxygenase {ECO:0000256|RuleBase:RU003975}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00001524163530362-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15718LOX1_5 EC:1.13.11.58 Linoleic acid metabolism map00591


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005515  protein binding

GO:0016491  oxidoreductase activity

GO:0016702  oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

GO:0046872  metal ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000096.1PF01477.18PLAT681596.70E-21
Glyur000001s00000096.1PF00305.14Lipoxygenase1728440


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.247
SRR1783600control10.302
SRR1783602moderate drought stress7.663
SRR1811619moderate drought stress7.489

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.327
DRR006520Root Summer glycyrrhizin high producing strain10.272
DRR006521Root Winter glycyrrhizin high producing strain2.962
DRR006522Root Winter glycyrrhizin high producing strain2.852
DRR006523Root Summer glycyrrhizin low producing strain13.747
DRR006524Root Summer glycyrrhizin low producing strain14.003
DRR006525Leaf Summer glycyrrhizin high producing strain12.622
DRR006526Leaf Summer glycyrrhizin high producing strain12.510

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.524
SRR2868004Drought Stress(Tissue:root)14.007
SRR2967015Control (Tissue:root)14.782

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.869
SRR9715740Leave23.378
SRR9715741Leave27.424
SRR9715739Root8.970
SRR9715742Root35.349
SRR9715743Root30.602

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.449
SRR8749028MeJA induced 9h13.503
SRR8749029MeJA induced 9h8.306
SRR8749030Uninduced3.348
SRR8749031Uninduced2.143
SRR8749032Uninduced2.698

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.371
SRR8400027Control-Root10.436

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved