Gene detail information of Glyur000001s00000137.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09830.10Glycinamide ribonucleotide (GAR) synthetase
NRXP_007144756.10hypothetical protein PHAVU_007G182100g [Phaseolus vulgaris]
COGYP_005030703.11.00E-167phosphoribosylamine-glycine ligase [Azospirillum brasilense Sp245]
Swissprottr|P52420|PUR2_ARATH0Phosphoribosylamine--glycine ligase, chloroplastic (Precursor)
trEMBLtr|V7BGW3|V7BGW3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW16750.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00001711427716279+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01945purD EC:6.3.4.13 Purine metabolism map00230


Gene Ontology

biological_process

GO:0009113  purine nucleobase biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0004637  phosphoribosylamine-glycine ligase activity

GO:0005524  ATP binding

GO:0046872  metal ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000137.1PF02844.10GARS_N941941.30E-31
Glyur000001s00000137.1PF01071.14GARS_A1953893.90E-84
Glyur000001s00000137.1PF02843.11GARS_C4245192.40E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.060
SRR1783600control4.098
SRR1783602moderate drought stress4.991
SRR1811619moderate drought stress4.664

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.587
DRR006520Root Summer glycyrrhizin high producing strain6.987
DRR006521Root Winter glycyrrhizin high producing strain21.924
DRR006522Root Winter glycyrrhizin high producing strain20.189
DRR006523Root Summer glycyrrhizin low producing strain11.079
DRR006524Root Summer glycyrrhizin low producing strain12.597
DRR006525Leaf Summer glycyrrhizin high producing strain6.619
DRR006526Leaf Summer glycyrrhizin high producing strain7.229

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.042
SRR2868004Drought Stress(Tissue:root)6.531
SRR2967015Control (Tissue:root)6.519

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.712
SRR9715740Leave7.911
SRR9715741Leave7.114
SRR9715739Root3.197
SRR9715742Root4.918
SRR9715743Root4.960

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.535
SRR8749028MeJA induced 9h43.792
SRR8749029MeJA induced 9h24.537
SRR8749030Uninduced9.611
SRR8749031Uninduced4.561
SRR8749032Uninduced6.316

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.050
SRR8400027Control-Root6.383

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved