Gene detail information of Glyur000001s00000161.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G54610.30Protein kinase superfamily protein
NRXP_003536103.10PREDICTED: probable serine/threonine-protein kinase At1g54610-like isoform X1 [Glycine max]
COGYP_003371239.13.00E-22serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|Q9ZVM9|Y1461_ARATH0Probable serine/threonine-protein kinase At1g54610
trEMBLtr|I1LBG8|I1LBG8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G30030.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00001835797841793-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000161.1PF00069.20Pkinase1234066.60E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.022
SRR1783600control16.197
SRR1783602moderate drought stress15.548
SRR1811619moderate drought stress15.617

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.137
DRR006520Root Summer glycyrrhizin high producing strain15.154
DRR006521Root Winter glycyrrhizin high producing strain19.002
DRR006522Root Winter glycyrrhizin high producing strain19.671
DRR006523Root Summer glycyrrhizin low producing strain14.908
DRR006524Root Summer glycyrrhizin low producing strain15.226
DRR006525Leaf Summer glycyrrhizin high producing strain5.803
DRR006526Leaf Summer glycyrrhizin high producing strain5.691

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.356
SRR2868004Drought Stress(Tissue:root)42.747
SRR2967015Control (Tissue:root)45.228

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.488
SRR9715740Leave15.973
SRR9715741Leave18.827
SRR9715739Root4.461
SRR9715742Root17.519
SRR9715743Root16.305

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.919
SRR8749028MeJA induced 9h21.722
SRR8749029MeJA induced 9h10.523
SRR8749030Uninduced15.676
SRR8749031Uninduced17.988
SRR8749032Uninduced11.934

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.879
SRR8400027Control-Root27.067

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved