Gene detail information of Glyur000001s00000169.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08720.10Protein kinase superfamily protein
NRXP_004495773.10PREDICTED: serine/threonine-protein kinase EDR1-like [Cicer arietinum]
COGYP_001958461.11.00E-46hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FPR3|EDR1_ARATH0Serine/threonine-protein kinase EDR1
trEMBLtr|A0A072VYA0|A0A072VYA0_MEDTR0MAP kinase kinase kinase-like protein {ECO:0000313|EMBL:KEH43050.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00001871190879378-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000169.1PF14381.1EDR11443293.90E-63
Glyur000001s00000169.1PF07714.12Pkinase_Tyr6689171.70E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.025
SRR1783600control34.234
SRR1783602moderate drought stress36.218
SRR1811619moderate drought stress37.233

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.019
DRR006520Root Summer glycyrrhizin high producing strain31.701
DRR006521Root Winter glycyrrhizin high producing strain75.446
DRR006522Root Winter glycyrrhizin high producing strain73.019
DRR006523Root Summer glycyrrhizin low producing strain57.695
DRR006524Root Summer glycyrrhizin low producing strain58.215
DRR006525Leaf Summer glycyrrhizin high producing strain30.728
DRR006526Leaf Summer glycyrrhizin high producing strain30.310

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.299
SRR2868004Drought Stress(Tissue:root)51.965
SRR2967015Control (Tissue:root)50.035

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave69.045
SRR9715740Leave47.677
SRR9715741Leave83.274
SRR9715739Root13.262
SRR9715742Root54.065
SRR9715743Root49.533

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h82.874
SRR8749028MeJA induced 9h95.289
SRR8749029MeJA induced 9h107.614
SRR8749030Uninduced93.075
SRR8749031Uninduced97.630
SRR8749032Uninduced99.123

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.553
SRR8400027Control-Root37.633

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved