Gene detail information of Glyur000001s00000206.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G02590.23.00E-52basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NRXP_004496017.11.18E-157PREDICTED: transcription factor UNE12-like [Cicer arietinum]
Swissprottr|O22768|UNE12_ARATH7.00E-76Transcription factor UNE12
trEMBLtr|A0A072VNM4|A0A072VNM4_MEDTR2.00E-156Transcription factor UNE12-like protein {ECO:0000313|EMBL:KEH43018.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0000110924051099203+


Gene family

Gene familysubfamily
Transcription Factors FamilybHLH


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0046983  protein dimerization activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000206.1PF00010.21HLH2062504.60E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control116.879
SRR1783600control116.428
SRR1783602moderate drought stress155.557
SRR1811619moderate drought stress155.776

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain96.080
DRR006520Root Summer glycyrrhizin high producing strain95.343
DRR006521Root Winter glycyrrhizin high producing strain71.312
DRR006522Root Winter glycyrrhizin high producing strain68.837
DRR006523Root Summer glycyrrhizin low producing strain103.667
DRR006524Root Summer glycyrrhizin low producing strain103.233
DRR006525Leaf Summer glycyrrhizin high producing strain19.991
DRR006526Leaf Summer glycyrrhizin high producing strain20.590

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)73.742
SRR2868004Drought Stress(Tissue:root)103.537
SRR2967015Control (Tissue:root)114.585

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.435
SRR9715740Leave26.549
SRR9715741Leave36.780
SRR9715739Root47.197
SRR9715742Root90.081
SRR9715743Root72.982

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h110.310
SRR8749028MeJA induced 9h80.838
SRR8749029MeJA induced 9h124.995
SRR8749030Uninduced28.662
SRR8749031Uninduced23.485
SRR8749032Uninduced59.080

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root77.435
SRR8400027Control-Root79.832

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved