Gene detail information of Glyur000002s00000219.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G14600.12.00E-29Homeodomain-like superfamily protein
NRXP_007142823.11.09E-129hypothetical protein PHAVU_007G019900g [Phaseolus vulgaris]
Swissprottr|Q700D9|MYBF_ARATH5.00E-34Putative Myb family transcription factor At1g14600
trEMBLtr|V7BAB2|V7BAB2_PHAVU4.00E-130Uncharacterized protein {ECO:0000313|EMBL:ESW14817.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000028491389093+


Gene family

Gene familysubfamily
Transcription Factors FamilyG2-like
Carbohydrate-Active enzymes FamilyGT77
EAR motif-containing ProteinsG2-like


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000002s00000219.1PF00249.26Myb_DNA-binding20718.10E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.579
SRR1783600control9.654
SRR1783602moderate drought stress8.005
SRR1811619moderate drought stress7.599

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.260
DRR006520Root Summer glycyrrhizin high producing strain0.213
DRR006521Root Winter glycyrrhizin high producing strain0.182
DRR006522Root Winter glycyrrhizin high producing strain0.222
DRR006523Root Summer glycyrrhizin low producing strain1.010
DRR006524Root Summer glycyrrhizin low producing strain1.021
DRR006525Leaf Summer glycyrrhizin high producing strain0.968
DRR006526Leaf Summer glycyrrhizin high producing strain1.007

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.812
SRR2868004Drought Stress(Tissue:root)8.055
SRR2967015Control (Tissue:root)9.503

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.458
SRR9715740Leave0.825
SRR9715741Leave0.869
SRR9715739Root12.535
SRR9715742Root4.273
SRR9715743Root5.274

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h93.472
SRR8749028MeJA induced 9h123.764
SRR8749029MeJA induced 9h87.789
SRR8749030Uninduced23.704
SRR8749031Uninduced14.534
SRR8749032Uninduced19.636

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.594
SRR8400027Control-Root11.152

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved