Gene detail information of Glyur000002s00000225.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14590.1 | 7.00E-118 | Nucleotide-diphospho-sugar transferase family protein |
| NR | XP_004497167.1 | 0 | PREDICTED: uncharacterized protein At4g15970-like [Cicer arietinum] |
| Swissprot | tr|P0C042|Y4597_ARATH | 3.00E-101 | Uncharacterized protein At4g15970 |
| trEMBL | tr|A0A072VSD7|A0A072VSD7_MEDTR | 0 | Nucleotide-diphospho-sugar transferase family protein {ECO:0000313|EMBL:KEH44333.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 119713 | 123037 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT77 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000225.1 | PF03407.11 | Nucleotid_trans | 125 | 323 | 3.60E-62 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.073 |
| SRR1783600 | control | 0.033 |
| SRR1783602 | moderate drought stress | 0.031 |
| SRR1811619 | moderate drought stress | 0.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.041 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.299 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.421 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.699 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.213 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.556 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.205 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.112 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.170 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.076 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.372 |
| SRR8400027 | Control-Root | 0.491 |