Gene detail information of Glyur000002s00000258.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04760.1 | 7.00E-62 | Duplicated homeodomain-like superfamily protein |
| NR | XP_007142868.1 | 9.00E-138 | hypothetical protein PHAVU_007G023600g [Phaseolus vulgaris] |
| Swissprot | tr|Q8S9H7|DIV_ANTMA | 9.00E-58 | Transcription factor DIVARICATA |
| trEMBL | tr|V7BAF7|V7BAF7_PHAVU | 3.00E-138 | Uncharacterized protein {ECO:0000313|EMBL:ESW14862.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 310681 | 312989 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000258.1 | PF00249.26 | Myb_DNA-binding | 123 | 167 | 1.70E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.803 |
| SRR1783600 | control | 1.799 |
| SRR1783602 | moderate drought stress | 3.412 |
| SRR1811619 | moderate drought stress | 3.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.031 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.760 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.766 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.593 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.475 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 33.050 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.321 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.697 |
| SRR2868004 | Drought Stress(Tissue:root) | 20.554 |
| SRR2967015 | Control (Tissue:root) | 28.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 16.557 |
| SRR9715740 | Leave | 11.038 |
| SRR9715741 | Leave | 25.104 |
| SRR9715739 | Root | 10.041 |
| SRR9715742 | Root | 14.341 |
| SRR9715743 | Root | 14.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.046 |
| SRR8749028 | MeJA induced 9h | 54.544 |
| SRR8749029 | MeJA induced 9h | 59.979 |
| SRR8749030 | Uninduced | 54.144 |
| SRR8749031 | Uninduced | 108.027 |
| SRR8749032 | Uninduced | 111.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 15.284 |
| SRR8400027 | Control-Root | 9.828 |