Gene detail information of Glyur000002s00000268.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04820.1 | 1.00E-39 | ovate family protein 13 |
| NR | NP_001235247.1 | 1.48E-125 | uncharacterized protein LOC100527123 [Glycine max] |
| Swissprot | tr|Q9FMC8|OPF13_ARATH | 5.00E-69 | Transcription repressor OFP13 |
| trEMBL | tr|C6T3D2|C6T3D2_SOYBN | 6.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G24660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 394117 | 394839 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000268.1 | PF04844.8 | Ovate | 138 | 196 | 1.50E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.053 |
| SRR1811619 | moderate drought stress | 0.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.490 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.755 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.936 |
| SRR2967015 | Control (Tissue:root) | 2.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.344 |
| SRR9715740 | Leave | 1.218 |
| SRR9715741 | Leave | 0.271 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.102 |
| SRR8749028 | MeJA induced 9h | 0.034 |
| SRR8749029 | MeJA induced 9h | 0.084 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.395 |
| SRR8400027 | Control-Root | 0.633 |