Gene detail information of Glyur000002s00000290.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G68640.16.00E-122bZIP transcription factor family protein
NRXP_007142889.10hypothetical protein PHAVU_007G025500g [Phaseolus vulgaris]
Swissprottr|Q9SX27|PAN_ARATH7.00E-165Transcription factor PERIANTHIA
trEMBLtr|V7BDA6|V7BDA6_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW14883.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00002487707490965+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000002s00000290.1PF00170.16bZIP_11681981.40E-07
Glyur000002s00000290.1PF14144.1DOG12533312.10E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.133
SRR1783600control0.134
SRR1783602moderate drought stress1.332
SRR1811619moderate drought stress1.241

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.463
DRR006520Root Summer glycyrrhizin high producing strain0.440
DRR006521Root Winter glycyrrhizin high producing strain0.080
DRR006522Root Winter glycyrrhizin high producing strain0.158
DRR006523Root Summer glycyrrhizin low producing strain0.310
DRR006524Root Summer glycyrrhizin low producing strain0.252
DRR006525Leaf Summer glycyrrhizin high producing strain0.468
DRR006526Leaf Summer glycyrrhizin high producing strain0.422

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.158
SRR2868004Drought Stress(Tissue:root)0.990
SRR2967015Control (Tissue:root)0.822

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.097
SRR9715740Leave0.273
SRR9715741Leave0.000
SRR9715739Root0.394
SRR9715742Root0.693
SRR9715743Root0.216

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.026
SRR8749028MeJA induced 9h8.260
SRR8749029MeJA induced 9h4.592
SRR8749030Uninduced0.987
SRR8749031Uninduced0.261
SRR8749032Uninduced0.703

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.329
SRR8400027Control-Root0.312

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved