Gene detail information of Glyur000002s00000301.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G25840.10Protein kinase superfamily protein
NRXP_004497282.10PREDICTED: serine/threonine-protein kinase PRP4 homolog [Cicer arietinum]
COGNP_864467.15.00E-13serine/threonine-protein kinase pknA [Rhodopirellula baltica SH 1]
Swissprottr|P51568|AFC3_ARATH4.00E-41Serine/threonine-protein kinase AFC3
trEMBLtr|K7LLT9|K7LLT9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G42220.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00002527517536528-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000002s00000301.1PF00069.20Pkinase70110156.10E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control43.917
SRR1783600control44.659
SRR1783602moderate drought stress77.374
SRR1811619moderate drought stress76.700

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain43.959
DRR006520Root Summer glycyrrhizin high producing strain43.822
DRR006521Root Winter glycyrrhizin high producing strain47.228
DRR006522Root Winter glycyrrhizin high producing strain45.837
DRR006523Root Summer glycyrrhizin low producing strain57.299
DRR006524Root Summer glycyrrhizin low producing strain57.402
DRR006525Leaf Summer glycyrrhizin high producing strain35.587
DRR006526Leaf Summer glycyrrhizin high producing strain35.384

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.197
SRR2868004Drought Stress(Tissue:root)42.312
SRR2967015Control (Tissue:root)47.629

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.495
SRR9715740Leave25.835
SRR9715741Leave30.285
SRR9715739Root3.850
SRR9715742Root28.043
SRR9715743Root22.864

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.357
SRR8749028MeJA induced 9h52.545
SRR8749029MeJA induced 9h24.827
SRR8749030Uninduced39.020
SRR8749031Uninduced45.142
SRR8749032Uninduced31.556

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.739
SRR8400027Control-Root39.783

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved