Gene detail information of Glyur000002s00000341.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68320.1 | 2.00E-69 | myb domain protein 62 |
| NR | XP_007142925.1 | 1.31E-178 | hypothetical protein PHAVU_007G028700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LK95|MYB21_ARATH | 2.00E-63 | Transcription factor MYB21 |
| trEMBL | tr|V7BAR9|V7BAR9_PHAVU | 5.00E-179 | Uncharacterized protein {ECO:0000313|EMBL:ESW14919.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 810340 | 811471 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000341.1 | PF00249.26 | Myb_DNA-binding | 26 | 73 | 1.30E-15 |
| Glyur000002s00000341.1 | PF00249.26 | Myb_DNA-binding | 79 | 122 | 3.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.045 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.157 |
| SRR2967015 | Control (Tissue:root) | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.176 |
| SRR9715740 | Leave | 0.280 |
| SRR9715741 | Leave | 0.448 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.262 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 3.169 |
| SRR8749029 | MeJA induced 9h | 0.176 |
| SRR8749030 | Uninduced | 7.266 |
| SRR8749031 | Uninduced | 0.500 |
| SRR8749032 | Uninduced | 2.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.036 |
| SRR8400027 | Control-Root | 0.018 |