Gene detail information of Glyur000002s00000352.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68360.1 | 3.00E-34 | C2H2 and C2HC zinc fingers superfamily protein |
| NR | XP_007142933.1 | 1.68E-122 | hypothetical protein PHAVU_007G029500g [Phaseolus vulgaris] |
| Swissprot | tr|Q39265|ZFP6_ARATH | 2.00E-28 | Zinc finger protein 6 |
| trEMBL | tr|V7BAM1|V7BAM1_PHAVU | 6.00E-123 | Uncharacterized protein {ECO:0000313|EMBL:ESW14927.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 873714 | 874541 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 99.116 |
| SRR1783600 | control | 99.574 |
| SRR1783602 | moderate drought stress | 105.778 |
| SRR1811619 | moderate drought stress | 106.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 65.346 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 62.402 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.520 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.645 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 66.866 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 63.865 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.494 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 106.553 |
| SRR2868004 | Drought Stress(Tissue:root) | 112.050 |
| SRR2967015 | Control (Tissue:root) | 106.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.799 |
| SRR9715740 | Leave | 0.752 |
| SRR9715741 | Leave | 0.158 |
| SRR9715739 | Root | 116.173 |
| SRR9715742 | Root | 53.489 |
| SRR9715743 | Root | 60.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.078 |
| SRR8749028 | MeJA induced 9h | 4.611 |
| SRR8749029 | MeJA induced 9h | 6.204 |
| SRR8749030 | Uninduced | 4.168 |
| SRR8749031 | Uninduced | 0.661 |
| SRR8749032 | Uninduced | 2.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 98.000 |
| SRR8400027 | Control-Root | 114.027 |