Gene detail information of Glyur000002s00000359.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G68400.10leucine-rich repeat transmembrane protein kinase family protein
NRXP_007142938.10hypothetical protein PHAVU_007G029900g [Phaseolus vulgaris]
COGYP_001958461.16.00E-22hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9M9C5|Y1680_ARATH0Probable leucine-rich repeat receptor-like protein kinase At1g68400 (Precursor)
trEMBLtr|V7BAM5|V7BAM5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW14932.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00002907591911008-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000002s00000359.1PF08263.7LRRNT_226639.80E-12
Glyur000002s00000359.1PF12799.2LRR_4891252.00E-06
Glyur000002s00000359.1PF13855.1LRR_81371942.20E-06
Glyur000002s00000359.1PF00069.20Pkinase3655623.40E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.337
SRR1783600control3.361
SRR1783602moderate drought stress2.166
SRR1811619moderate drought stress2.303

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.215
DRR006520Root Summer glycyrrhizin high producing strain2.097
DRR006521Root Winter glycyrrhizin high producing strain0.866
DRR006522Root Winter glycyrrhizin high producing strain0.991
DRR006523Root Summer glycyrrhizin low producing strain1.699
DRR006524Root Summer glycyrrhizin low producing strain1.602
DRR006525Leaf Summer glycyrrhizin high producing strain1.520
DRR006526Leaf Summer glycyrrhizin high producing strain1.516

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.590
SRR2868004Drought Stress(Tissue:root)6.300
SRR2967015Control (Tissue:root)8.212

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.974
SRR9715740Leave0.494
SRR9715741Leave2.728
SRR9715739Root8.570
SRR9715742Root5.493
SRR9715743Root5.665

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.646
SRR8749028MeJA induced 9h3.512
SRR8749029MeJA induced 9h5.373
SRR8749030Uninduced1.294
SRR8749031Uninduced4.772
SRR8749032Uninduced13.527

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.281
SRR8400027Control-Root11.396

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved