Gene detail

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Gene detail information of Glyur000002s00000364.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67000.1	1.00E-100	Protein kinase superfamily protein
NR	XP_004497065.1	0	PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum]
COG	YP_001958461.1	4.00E-23	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q3ECH2\|Y1670_ARATH	3.00E-118	Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBL	tr\|G7IC85\|G7IC85_MEDTR	0	Tyrosine kinase family protein {ECO:0000313\|EMBL:AES62872.2}

Sequence

Transcript Sequence

>Glyur000002s00000364.1
ATGAGTCCAGTATATGAATTTCTCTTCCTCTTGTTTTCTCACCTTATGCTACTACCTGTATTGGTGGGTGGAAATGATAATGGGTACCAAATAGGAAAGTGTCCACCTTCATTCAATTGTGGATATCTTGGCAATATCAGCTTCCCTTTCACAAAATCAGAACGCCGGGACTGTGGCTTCTTGCCCATACAGAATTGTGATGATGATCCACACAAGGACAAAATTATCCAATTGCAGAATAAAGGGAAATGGTTTGGGGTTGTATCCGTTTCTCACTTTCCCCTTAGAAATACTTGTCTACTTAGAGACATCCGTCTATATGGACTTGTGCAATCCAGAAATTGTGAGGCTTTCGCATATAATTATACTCTTCCTCCCACCGCCTCTCCCTTTGTTTCTCTTCTTATCGAATCCANTGCAACCATGTTCAGGTGCAACCGCACCCTCCATGTCAGCCCCNCAACAAATATCCATAAATATACAGAGTGCCCTGACTATGATCTCTACTACGGGCCTCACATCTCTGCTGATAATGCATCTCNNAACGTCCCTGACGGTATAGACCCTTTTGGATTCGTAACTGCTGACGTCTCCACTGAAGTAAAAATAACAGAGGAATGTGCATACTGTCACTACACCCAAAGCGGGCGGTGTCAACTTGACAGCAATAAGAGATTNTTTTGTGCCGGAAGTTACGATAAAACTGGAAAGAAGATGCCGATAGTGGCAACAGCGGCCTTAGTGGTTGTTGGAGTTGCAGTGCTGATTGTCTTGGCTTGCTGCTTTAGGACAAAGATCTTCCCTCCTACATTTCTTTTGTTTGGGAAGGAGAATTCAACCCATCGGACTATTGAGGAGTTTTTGAAGGAACATCTAGCTCTTCCTGCAGCCAGGTACAGTTATTCAGATGTCAAGAAAATAACAAATTCTTTCACAAACAAATTAGGCCAAGGAGGGTACGGATGTGTATATAAAGGAAAGTTACGTGATGGAAGTGTGGTTGCAGTGAAGGTTTTAAGTGAGTCAAAAGGTAATGGAGAGGATTTCATTAANGAAGTTGCGAGTATTAGTAGGACTTCACATGTTAACATTGTTAGACTTTTGGGGTTCTCTTTGGATGGTTCTAAAAAAACACTAATATATGAGTTCATGTCTAATGGATCTCTTNAGAAGTTCATATATGAAGAGAAAAATCCATTAAAGNATGATCGCCAATTGGATTGCAAAACATTGTATGATATTGCAGTTGGCGTTGCTCGTGGATTAGAGTATTTGCACAGAGGTTGCAATGCTAGAATTTTGCATTTTGACATAAAACCTCACAATGTATTACTAGATGAGGATTTTTGTCCAAAAATTTCTGATTTTGGACTTGCTAAAATATGCCCAANAAAAGAGAGTATTGTATCCATATTTGGTGCGAGAGGAACAGCAGGATATATTGCTCCAGAGTTGTTCTCCAGAAGTTTTGGTGGGGTGTCACATAAATCAGATGTCTACAGTTACGGAATGATGGTTTTGGAGATGGTTGGCCAAAGAAAGAATATTAAGGTTGAAGTTGATTGTTCTAGTGAGTTATATTTTCCACACTGGATTTACAAGCGTCTTGAATTAAATCATCAGCTTGGACTCCGATGTATCAAAAATGATATTGATGAAGAAATGGTCAGAAAAATGACGGTGGTGAGTTTATGGTGCATACAAACTGACCCTTCAAATCGACCAGCAATGCATAAAGTGGTGGAAATGCTGCAAGGAAGCCTTGAAGTGTTNGAAATACCACCCAAACCCTATTTGTCTTCTCCTTCAAGATCTTCCGCCCATTTGTCATCTAAAAGATTGATGGCTTACGTTTATGAATTTCTCTTCCTCTTGTTTTCTCACCTTATGCTAATACTTGTCTTAGTGGGTGGAGAAGGGAATAAGTACCAAGGACTAGGAGAGTGTCCACCTTCATTCAATTGTGGATATCTTGGCAATATCGACTTCCCTTTCACCACAACAGAANGCCAGGACTGTGGCTTATTGGCCATACTGAATTGTGGTGATGATCCACACAAGGACAAAATGGCCCAATTGCAGAATAAAGGGAAATGGTATGCGGTTGTATCCGTTTCACAAAACCAGAACGCCAGGAATACATGCAACTGTACCAACATGTGCAATCCAGAAGTTGTGAAGCTTTCACATATAATTATACTCTTCCTACCAATGGCCACCACCTTTCCCTTTGCTTCTCTTCATATCAAATCCAATGCAACCCTGTTCAGGTGCAACCGCACCCTCCGTGTCAACCCCACAACAAATATCTATAAATATGCAGGGTGCCCTGACTACGATCTCTACTACAGGCCTCCTGTCTCTGCTGATAATGCATCTCTGAGTGCTTTGACAGCGTGTTCAACGGTCCAGCTTCCAGTTAAAGACCTCTCTGACAGTATGGACCCTTTTGCATTAGTAACTGCTGATATCTCCCCTGAAGTACAAATAACTGAGGAATGCGCATATTGTCACTACACCCAAAGCGGGCGGTGTCAACTTGACAGCAGAGAAAGATTTTTGTGTGCCCAAAGTCACGGCTCGGCGAGTGGAATTGTCTTGGCATGCAGTTTTAGAAGAAAAGTCTTCCCTCCCTCATTTCTTTTGTTCATGAAGGAGAATCAAACCTTTCAGATTATTGAGAGAAACATGCTTCCTGCAGCCAGGTATACTTATTCAGTTGTCAAGAAAATAACAAACTCTTTTACAAACAAATTAGGCCAAGGAGGGTACGGAAGTGTATACAAAGGGAAGTTACACGATGGACGTGTGGTTGCCATTAGGGTTTTAAGTGAATCTAAAGGAGATGGGGAGGATTTCATTAATAAAGTTGCCAGTATTAGTAGGACTTCACATGTTAACATTGTTAGACTTCTGGGGTTCTATTTGGGTGATTCTAAAAAGGCACTAATATATGAAATGTCTAATGGATCTCTTGAGAAGTTCATATGCGAAGAGAAAAAACCATTGAAGAATGATCGCCAATTGGATTGCAAAACATTGTATGATATTGCAGTTGGTGTTGCTCGTGGACTAGAGTATTTGCATAGAGGCTGCAATGCTAGAATTTTGCATTTTGACATAAAACCTCAATGTATTACTAGATGA

Protein Sequence

>Glyur000002s00000364.1
MSPVYEFLFLLFSHLMLLPVLVGGNDNGYQIGKCPPSFNCGYLGNISFPFTKSERRDCGFLPIQNCDDDPHKDKIIQLQNKGKWFGVVSVSHFPLRNTCLLRDIRLYGLVQSRNCEAFAYNYTLPPTASPFVSLLIESXATMFRCNRTLHVSPXTNIHKYTECPDYDLYYGPHISADNASXNVPDGIDPFGFVTADVSTEVKITEECAYCHYTQSGRCQLDSNKRXFCAGSYDKTGKKMPIVATAALVVVGVAVLIVLACCFRTKIFPPTFLLFGKENSTHRTIEEFLKEHLALPAARYSYSDVKKITNSFTNKLGQGGYGCVYKGKLRDGSVVAVKVLSESKGNGEDFIXEVASISRTSHVNIVRLLGFSLDGSKKTLIYEFMSNGSLXKFIYEEKNPLKXDRQLDCKTLYDIAVGVARGLEYLHRGCNARILHFDIKPHNVLLDEDFCPKISDFGLAKICPXKESIVSIFGARGTAGYIAPELFSRSFGGVSHKSDVYSYGMMVLEMVGQRKNIKVEVDCSSELYFPHWIYKRLELNHQLGLRCIKNDIDEEMVRKMTVVSLWCIQTDPSNRPAMHKVVEMLQGSLEVXEIPPKPYLSSPSRSSAHLSSKRLMAYVYEFLFLLFSHLMLILVLVGGEGNKYQGLGECPPSFNCGYLGNIDFPFTTTEXQDCGLLAILNCGDDPHKDKMAQLQNKGKWYAVVSVSQNQNARNTCNCTNMCNPEVVKLSHIIILFLPMATTFPFASLHIKSNATLFRCNRTLRVNPTTNIYKYAGCPDYDLYYRPPVSADNASLSALTACSTVQLPVKDLSDSMDPFALVTADISPEVQITEECAYCHYTQSGRCQLDSRERFLCAQSHGSASGIVLACSFRRKVFPPSFLLFMKENQTFQIIERNMLPAARYTYSVVKKITNSFTNKLGQGGYGSVYKGKLHDGRVVAIRVLSESKGDGEDFINKVASISRTSHVNIVRLLGFYLGDSKKALIYEMSNGSLEKFICEEKKPLKNDRQLDCKTLYDIAVGVARGLEYLHRGCNARILHFDIKPQCITR

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00002	914982	926168	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000002s00000364.1	PF00069.20	Pkinase	312	582	8.70E-43
Glyur000002s00000364.1	PF07714.12	Pkinase_Tyr	915	1041	1.60E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.793
SRR1783600	control	0.731
SRR1783602	moderate drought stress	0.609
SRR1811619	moderate drought stress	0.686

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.678
DRR006520	Root Summer glycyrrhizin high producing strain	4.926
DRR006521	Root Winter glycyrrhizin high producing strain	2.329
DRR006522	Root Winter glycyrrhizin high producing strain	2.452
DRR006523	Root Summer glycyrrhizin low producing strain	1.035
DRR006524	Root Summer glycyrrhizin low producing strain	1.093
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.731
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.812

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.498
SRR2868004	Drought Stress(Tissue:root)	0.447
SRR2967015	Control (Tissue:root)	0.508

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	6.649
SRR9715740	Leave	0.609
SRR9715741	Leave	7.382
SRR9715739	Root	0.006
SRR9715742	Root	1.131
SRR9715743	Root	1.053

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.216
SRR8749028	MeJA induced 9h	0.313
SRR8749029	MeJA induced 9h	0.188
SRR8749030	Uninduced	1.035
SRR8749031	Uninduced	0.252
SRR8749032	Uninduced	0.214

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.528
SRR8400027	Control-Root	1.419