Gene detail information of Glyur000003s00001164.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G61130.10galacturonosyltransferase 1
NRXP_004492659.10PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase-like [Cicer arietinum]
COGYP_007713204.11.00E-06hypothetical protein MMALV_05390 [Candidatus Methanomethylophilus alvus Mx1201]
Swissprottr|Q9LE59|GAUT1_ARATH0Polygalacturonate 4-alpha-galacturonosyltransferase
trEMBLtr|G7L1F3|G7L1F3_MEDTR0CAZy family GT8 glycosyltransferase {ECO:0000313|EMBL:AES80022.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00003310090315451-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13648GAUT EC:2.4.1.43 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups

GO:0047262  polygalacturonate 4-alpha-galacturonosyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000003s00001164.1PF01501.15Glyco_transf_83046171.60E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.883
SRR1783600control25.421
SRR1783602moderate drought stress18.513
SRR1811619moderate drought stress18.321

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.575
DRR006520Root Summer glycyrrhizin high producing strain14.744
DRR006521Root Winter glycyrrhizin high producing strain3.371
DRR006522Root Winter glycyrrhizin high producing strain3.516
DRR006523Root Summer glycyrrhizin low producing strain22.491
DRR006524Root Summer glycyrrhizin low producing strain22.244
DRR006525Leaf Summer glycyrrhizin high producing strain8.828
DRR006526Leaf Summer glycyrrhizin high producing strain8.891

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.485
SRR2868004Drought Stress(Tissue:root)29.198
SRR2967015Control (Tissue:root)28.240

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.211
SRR9715740Leave10.985
SRR9715741Leave15.547
SRR9715739Root3.405
SRR9715742Root16.650
SRR9715743Root14.328

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h38.812
SRR8749028MeJA induced 9h35.333
SRR8749029MeJA induced 9h30.428
SRR8749030Uninduced14.647
SRR8749031Uninduced8.214
SRR8749032Uninduced7.211

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.800
SRR8400027Control-Root36.365

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved