Gene detail information of Glyur000003s00001180.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003551647.1 | 0 | PREDICTED: polyphenol oxidase, chloroplastic [Glycine max] |
| Swissprot | tr|P43309|PPO_MALDO | 4.00E-178 | Polyphenol oxidase, chloroplastic (Precursor) |
| trEMBL | tr|K7MU36|K7MU36_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G45895.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00003 | 412653 | 414476 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00422 | E1.10.3.1 | EC:1.10.3.1 | Tyrosine metabolism | map00350 |
| Isoquinoline alkaloid biosynthesis | map00950 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000003s00001180.1 | PF00264.15 | Tyrosinase | 184 | 392 | 4.00E-34 |
| Glyur000003s00001180.1 | PF12142.3 | PPO1_DWL | 403 | 453 | 2.50E-23 |
| Glyur000003s00001180.1 | PF12143.3 | PPO1_KFDV | 478 | 603 | 7.40E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.530 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.283 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.185 |
| SRR2967015 | Control (Tissue:root) | 0.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.137 |
| SRR9715740 | Leave | 13.636 |
| SRR9715741 | Leave | 2.856 |
| SRR9715739 | Root | 0.054 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 3.466 |
| SRR8749029 | MeJA induced 9h | 0.868 |
| SRR8749030 | Uninduced | 2.708 |
| SRR8749031 | Uninduced | 2.329 |
| SRR8749032 | Uninduced | 1.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.251 |
| SRR8400027 | Control-Root | 0.027 |