Gene detail information of Glyur000003s00001189.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00720.10shaggy-like protein kinase 32
NRXP_004492676.10PREDICTED: shaggy-related protein kinase theta-like [Cicer arietinum]
COGYP_008149401.12.00E-23hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
Swissprottr|Q96287|KSG8_ARATH0Shaggy-related protein kinase theta
trEMBLtr|G7L1H1|G7L1H1_MEDTR0Shaggy-like kinase {ECO:0000313|EMBL:AES80040.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00003456495461382-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000003s00001189.1PF00069.20Pkinase1424238.80E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.849
SRR1783600control23.873
SRR1783602moderate drought stress34.089
SRR1811619moderate drought stress33.686

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.680
DRR006520Root Summer glycyrrhizin high producing strain23.429
DRR006521Root Winter glycyrrhizin high producing strain29.272
DRR006522Root Winter glycyrrhizin high producing strain28.695
DRR006523Root Summer glycyrrhizin low producing strain43.682
DRR006524Root Summer glycyrrhizin low producing strain43.536
DRR006525Leaf Summer glycyrrhizin high producing strain17.827
DRR006526Leaf Summer glycyrrhizin high producing strain17.680

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)88.593
SRR2868004Drought Stress(Tissue:root)107.652
SRR2967015Control (Tissue:root)99.193

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave54.318
SRR9715740Leave42.156
SRR9715741Leave71.664
SRR9715739Root11.544
SRR9715742Root32.322
SRR9715743Root30.074

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h136.718
SRR8749028MeJA induced 9h77.632
SRR8749029MeJA induced 9h114.196
SRR8749030Uninduced122.556
SRR8749031Uninduced213.613
SRR8749032Uninduced157.058

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.254
SRR8400027Control-Root47.922

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved