Gene detail information of Glyur000003s00001191.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00730.10Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
NRXP_007139955.10hypothetical protein PHAVU_008G072700g [Phaseolus vulgaris]
Swissprottr|Q0WV12|ANL2_ARATH0Homeobox-leucine zipper protein ANTHOCYANINLESS 2
trEMBLtr|V7B298|V7B298_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW11949.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00003471178478267-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB
EAR motif-containing ProteinsHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0008289  lipid binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000003s00001191.1PF00046.24Homeobox1351902.60E-18
Glyur000003s00001191.1PF01852.14START3485739.50E-53


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.084
SRR1783600control0.089
SRR1783602moderate drought stress0.029
SRR1811619moderate drought stress0.033

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.040
DRR006524Root Summer glycyrrhizin low producing strain0.009
DRR006525Leaf Summer glycyrrhizin high producing strain9.482
DRR006526Leaf Summer glycyrrhizin high producing strain9.226

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.849
SRR2868004Drought Stress(Tissue:root)1.148
SRR2967015Control (Tissue:root)1.512

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.143
SRR9715740Leave22.932
SRR9715741Leave16.396
SRR9715739Root0.019
SRR9715742Root0.520
SRR9715743Root0.185

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.527
SRR8749028MeJA induced 9h0.385
SRR8749029MeJA induced 9h0.650
SRR8749030Uninduced0.306
SRR8749031Uninduced0.000
SRR8749032Uninduced0.043

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.149
SRR8400027Control-Root0.565

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved