Gene detail information of Glyur000003s00001224.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00550.10digalactosyl diacylglycerol deficient 2
NRQ6DW73.10RecName: Full=Digalactosyldiacylglycerol synthase 2, chloroplastic [Lotus japonicus]
Swissprottr|Q6DW73|DGDG2_LOTJA0Digalactosyldiacylglycerol synthase 2, chloroplastic
trEMBLtr|I3S2B1|I3S2B1_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK34403.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00003706256710166-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09480E2.4.1.241 EC:2.4.1.241 Glycerolipid metabolism map00561


Gene Ontology

biological_process

GO:0009058  biosynthetic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000003s00001224.1PF00534.15Glycos_transf_12213347.80E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.966
SRR1783600control13.944
SRR1783602moderate drought stress16.800
SRR1811619moderate drought stress16.577

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.072
DRR006520Root Summer glycyrrhizin high producing strain18.718
DRR006521Root Winter glycyrrhizin high producing strain26.132
DRR006522Root Winter glycyrrhizin high producing strain25.451
DRR006523Root Summer glycyrrhizin low producing strain21.578
DRR006524Root Summer glycyrrhizin low producing strain21.468
DRR006525Leaf Summer glycyrrhizin high producing strain12.930
DRR006526Leaf Summer glycyrrhizin high producing strain12.786

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.595
SRR2868004Drought Stress(Tissue:root)45.105
SRR2967015Control (Tissue:root)43.447

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.098
SRR9715740Leave27.471
SRR9715741Leave25.466
SRR9715739Root17.815
SRR9715742Root22.488
SRR9715743Root19.051

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.145
SRR8749028MeJA induced 9h43.659
SRR8749029MeJA induced 9h36.054
SRR8749030Uninduced40.365
SRR8749031Uninduced48.175
SRR8749032Uninduced35.203

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.426
SRR8400027Control-Root33.411

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved