Gene detail information of Glyur000003s00001230.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00570.10NAD-dependent malic enzyme 2
NRXP_003623882.10Malic enzyme [Medicago truncatula]
COGYP_005607828.15.00E-157malic enzyme [Bradyrhizobium japonicum USDA 6]
Swissprottr|P37225|MAON_SOLTU0NAD-dependent malic enzyme 59 kDa isoform, mitochondrial (Precursor)
trEMBLtr|G7L3I0|G7L3I0_MEDTR0Malic enzyme {ECO:0000256|RuleBase:RU003426}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00003726349733455+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00028E1.1.1.39 EC:1.1.1.39 Carbon metabolism map01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006108  malate metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004470  malic enzyme activity

GO:0004471  malate dehydrogenase (decarboxylating) (NAD+) activity

GO:0051287  NAD binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000003s00001230.1PF00390.14malic1032831.70E-75
Glyur000003s00001230.1PF03949.10Malic_M2935561.60E-81


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.960
SRR1783600control7.872
SRR1783602moderate drought stress6.324
SRR1811619moderate drought stress6.368

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.307
DRR006520Root Summer glycyrrhizin high producing strain18.451
DRR006521Root Winter glycyrrhizin high producing strain6.320
DRR006522Root Winter glycyrrhizin high producing strain6.051
DRR006523Root Summer glycyrrhizin low producing strain48.788
DRR006524Root Summer glycyrrhizin low producing strain48.148
DRR006525Leaf Summer glycyrrhizin high producing strain1.072
DRR006526Leaf Summer glycyrrhizin high producing strain0.981

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.981
SRR2868004Drought Stress(Tissue:root)12.122
SRR2967015Control (Tissue:root)11.089

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.850
SRR9715740Leave2.394
SRR9715741Leave4.146
SRR9715739Root3.021
SRR9715742Root8.802
SRR9715743Root8.399

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.056
SRR8749028MeJA induced 9h11.750
SRR8749029MeJA induced 9h16.442
SRR8749030Uninduced8.812
SRR8749031Uninduced6.366
SRR8749032Uninduced5.951

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.139
SRR8400027Control-Root12.719

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved