Gene detail information of Glyur000003s00001233.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45790.16.00E-110phosphomannomutase
NRXP_004492705.13.94E-154PREDICTED: phosphomannomutase-like [Cicer arietinum]
Swissprottr|Q1W376|PMM_SOYBN2.00E-154Phosphomannomutase
trEMBLtr|C6T8C4|C6T8C4_SOYBN7.00E-152Phosphomannomutase {ECO:0000256|RuleBase:RU361118}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00003748463755009+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17497PMM EC:5.4.2.8 Fructose and mannose metabolism map00051
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0019307  mannose biosynthetic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003824  catalytic activity

GO:0004615  phosphomannomutase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000003s00001233.2PF03332.8PMM162291.50E-107


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control33.387
SRR1783600control32.078
SRR1783602moderate drought stress29.750
SRR1811619moderate drought stress28.759

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.492
DRR006520Root Summer glycyrrhizin high producing strain12.059
DRR006521Root Winter glycyrrhizin high producing strain6.315
DRR006522Root Winter glycyrrhizin high producing strain5.322
DRR006523Root Summer glycyrrhizin low producing strain6.953
DRR006524Root Summer glycyrrhizin low producing strain7.714
DRR006525Leaf Summer glycyrrhizin high producing strain17.977
DRR006526Leaf Summer glycyrrhizin high producing strain17.559

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.018
SRR2868004Drought Stress(Tissue:root)23.015
SRR2967015Control (Tissue:root)21.859

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave39.883
SRR9715740Leave46.592
SRR9715741Leave24.693
SRR9715739Root24.370
SRR9715742Root14.987
SRR9715743Root20.174

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h38.049
SRR8749028MeJA induced 9h15.454
SRR8749029MeJA induced 9h30.276
SRR8749030Uninduced8.918
SRR8749031Uninduced6.344
SRR8749032Uninduced7.708

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.953
SRR8400027Control-Root29.971

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved