Gene detail information of Glyur000003s00001249.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45490.17.00E-135ataurora3
NRXP_006594130.10PREDICTED: serine/threonine-protein kinase Aurora-3 isoform X1 [Glycine max]
COGYP_003108731.13.00E-35serine/threonine protein kinase with PASTA sensor(s) [Acidimicrobium ferrooxidans DSM 10331]
Swissprottr|O64629|AUR3_ARATH5.00E-170Serine/threonine-protein kinase Aurora-3
trEMBLtr|I1LZ26|I1LZ26_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G20180.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00003827621830626+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0000226  microtubule cytoskeleton organization

GO:0000278  mitotic cell cycle

GO:0006468  protein phosphorylation

GO:0007049  cell cycle

GO:0007059  chromosome segregation

GO:0009966  regulation of signal transduction

GO:0032465  regulation of cytokinesis


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000003s00001249.1PF00069.20Pkinase172681.50E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.515
SRR1783600control2.537
SRR1783602moderate drought stress2.289
SRR1811619moderate drought stress2.317

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.419
DRR006520Root Summer glycyrrhizin high producing strain1.601
DRR006521Root Winter glycyrrhizin high producing strain1.102
DRR006522Root Winter glycyrrhizin high producing strain1.076
DRR006523Root Summer glycyrrhizin low producing strain2.902
DRR006524Root Summer glycyrrhizin low producing strain2.904
DRR006525Leaf Summer glycyrrhizin high producing strain0.997
DRR006526Leaf Summer glycyrrhizin high producing strain0.994

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.255
SRR2868004Drought Stress(Tissue:root)2.771
SRR2967015Control (Tissue:root)3.174

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.845
SRR9715740Leave0.964
SRR9715741Leave0.675
SRR9715739Root1.547
SRR9715742Root1.277
SRR9715743Root1.165

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.886
SRR8749028MeJA induced 9h2.188
SRR8749029MeJA induced 9h2.263
SRR8749030Uninduced0.732
SRR8749031Uninduced0.253
SRR8749032Uninduced0.167

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.285
SRR8400027Control-Root3.494

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved