Gene detail information of Glyur000004s00000370.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37650.11.00E-115GRAS family transcription factor
NRXP_004486891.10PREDICTED: protein SHORT-ROOT-like [Cicer arietinum]
Swissprottr|Q9SZF7|SHR_ARATH2.00E-145Protein SHORT-ROOT
trEMBLtr|I1M578|I1M578_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G42100.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0000427294081+


Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0008356  asymmetric cell division

GO:0009956  radial pattern formation

GO:0048366  leaf development


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000004s00000370.1PF03514.9GRAS734498.90E-94


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.731
SRR1783600control4.987
SRR1783602moderate drought stress9.592
SRR1811619moderate drought stress9.468

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.987
DRR006520Root Summer glycyrrhizin high producing strain19.418
DRR006521Root Winter glycyrrhizin high producing strain0.312
DRR006522Root Winter glycyrrhizin high producing strain0.321
DRR006523Root Summer glycyrrhizin low producing strain9.848
DRR006524Root Summer glycyrrhizin low producing strain9.209
DRR006525Leaf Summer glycyrrhizin high producing strain2.045
DRR006526Leaf Summer glycyrrhizin high producing strain2.142

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.619
SRR2868004Drought Stress(Tissue:root)17.487
SRR2967015Control (Tissue:root)7.187

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.721
SRR9715740Leave1.070
SRR9715741Leave1.283
SRR9715739Root4.393
SRR9715742Root15.074
SRR9715743Root13.752

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.099
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.047
SRR8749031Uninduced0.057
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.810
SRR8400027Control-Root11.191

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved