Gene detail information of Glyur000004s00000376.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06070.1 | 6.00E-128 | Basic-leucine zipper (bZIP) transcription factor family protein |
| NR | XP_004486898.1 | 0 | PREDICTED: probable transcription factor PosF21-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q04088|POF21_ARATH | 1.00E-154 | Probable transcription factor PosF21 |
| trEMBL | tr|I1M571|I1M571_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G42030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 47410 | 51289 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
| EAR motif-containing Proteins | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000004s00000376.1 | PF00170.16 | bZIP_1 | 227 | 285 | 1.20E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 48.568 |
| SRR1783600 | control | 49.334 |
| SRR1783602 | moderate drought stress | 55.584 |
| SRR1811619 | moderate drought stress | 55.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.356 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 45.400 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.390 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.809 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.183 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 50.894 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.430 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 38.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 43.542 |
| SRR2868004 | Drought Stress(Tissue:root) | 43.956 |
| SRR2967015 | Control (Tissue:root) | 47.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 35.938 |
| SRR9715740 | Leave | 39.487 |
| SRR9715741 | Leave | 47.037 |
| SRR9715739 | Root | 20.116 |
| SRR9715742 | Root | 31.868 |
| SRR9715743 | Root | 29.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 78.081 |
| SRR8749028 | MeJA induced 9h | 83.500 |
| SRR8749029 | MeJA induced 9h | 91.197 |
| SRR8749030 | Uninduced | 85.020 |
| SRR8749031 | Uninduced | 90.046 |
| SRR8749032 | Uninduced | 81.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 40.914 |
| SRR8400027 | Control-Root | 33.624 |