Gene detail information of Glyur000004s00000385.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G59480.14.00E-161pfkB-like carbohydrate kinase family protein
NRXP_003546905.10PREDICTED: fructokinase-2-like [Glycine max]
COGYP_002521328.13.00E-105putative fructokinase [Thermomicrobium roseum DSM 5159]
Swissprottr|Q42896|SCRK2_SOLLC0Fructokinase-2
trEMBLtr|I1MD61|I1MD61_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G03430.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000047922082951-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00847E2.7.1.4, scrK EC:2.7.1.4 Fructose and mannose metabolism map00051
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006014  D-ribose metabolic process


molecular_function

GO:0004747  ribokinase activity

GO:0016773  phosphotransferase activity, alcohol group as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000004s00000385.1PF00294.19PfkB143198.90E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control129.162
SRR1783600control130.521
SRR1783602moderate drought stress62.541
SRR1811619moderate drought stress63.042

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain63.979
DRR006520Root Summer glycyrrhizin high producing strain64.295
DRR006521Root Winter glycyrrhizin high producing strain7.202
DRR006522Root Winter glycyrrhizin high producing strain6.671
DRR006523Root Summer glycyrrhizin low producing strain21.073
DRR006524Root Summer glycyrrhizin low producing strain21.165
DRR006525Leaf Summer glycyrrhizin high producing strain14.262
DRR006526Leaf Summer glycyrrhizin high producing strain14.559

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)269.868
SRR2868004Drought Stress(Tissue:root)258.529
SRR2967015Control (Tissue:root)243.654

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave53.901
SRR9715740Leave13.131
SRR9715741Leave23.499
SRR9715739Root205.414
SRR9715742Root132.001
SRR9715743Root144.151

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h174.967
SRR8749028MeJA induced 9h146.044
SRR8749029MeJA induced 9h155.104
SRR8749030Uninduced187.382
SRR8749031Uninduced153.702
SRR8749032Uninduced248.583

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root221.564
SRR8400027Control-Root237.977

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved