Gene detail information of Glyur000004s00000388.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G59420.1 | 0 | crinkly4 |
| NR | KHN30097.1 | 0 | Serine/threonine-protein kinase-like protein ACR4 [Glycine soja] |
| COG | YP_002017974.1 | 8.00E-18 | serine/threonine protein kinase [Pelodictyon phaeoclathratiforme BU-1] |
| Swissprot | tr|Q9LX29|ACR4L_ARATH | 0 | Serine/threonine-protein kinase-like protein ACR4 (Precursor) |
| trEMBL | tr|K7M3J6|K7M3J6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G41951.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 96396 | 99062 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.4.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000004s00000388.1 | PF00069.20 | Pkinase | 449 | 630 | 6.10E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.001 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.919 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.018 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.010 |
| SRR2967015 | Control (Tissue:root) | 0.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.382 |
| SRR9715740 | Leave | 0.837 |
| SRR9715741 | Leave | 0.798 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.233 |
| SRR9715743 | Root | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.086 |
| SRR8749028 | MeJA induced 9h | 0.013 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.007 |
| SRR8400027 | Control-Root | 0.115 |